Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC022493.2-201ENST00000506122 481 ntBASIC0.89□□□□□ -2.27
NCK1P16333 SNORD79.1-201ENST00000516069 84 ntBASIC0.89□□□□□ -2.27
NCK1P16333 AP002004.2-201ENST00000531656 154 ntBASIC0.89□□□□□ -2.27
NCK1P16333 MIR4452-201ENST00000583004 71 ntBASIC0.89□□□□□ -2.27
NCK1P16333 MIR3942-201ENST00000585264 109 ntBASIC0.89□□□□□ -2.27
NCK1P16333 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.89□□□□□ -2.27
NCK1P16333 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
NCK1P16333 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
NCK1P16333 RNU6-910P-201ENST00000390844 107 ntBASIC0.88□□□□□ -2.27
NCK1P16333 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.88□□□□□ -2.27
NCK1P16333 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.88□□□□□ -2.27
NCK1P16333 AC063976.4-201ENST00000421971 163 ntBASIC0.88□□□□□ -2.27
NCK1P16333 MTND4LP16-201ENST00000440828 295 ntBASIC0.88□□□□□ -2.27
NCK1P16333 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.88□□□□□ -2.27
NCK1P16333 AC087343.1-201ENST00000477341 475 ntBASIC0.88□□□□□ -2.27
NCK1P16333 RNU6-314P-201ENST00000516574 104 ntBASIC0.88□□□□□ -2.27
NCK1P16333 RNU6-922P-201ENST00000516753 99 ntBASIC0.88□□□□□ -2.27
NCK1P16333 RNA5SP102-201ENST00000516865 106 ntBASIC0.88□□□□□ -2.27
NCK1P16333 RNU6-1314P-201ENST00000517139 104 ntBASIC0.88□□□□□ -2.27
NCK1P16333 RNU1-54P-201ENST00000517181 120 ntBASIC0.88□□□□□ -2.27
NCK1P16333 AC023157.2-201ENST00000540596 141 ntBASIC0.88□□□□□ -2.27
NCK1P16333 AC245505.1-201ENST00000556398 224 ntBASIC0.88□□□□□ -2.27
NCK1P16333 AC136932.1-201ENST00000574771 208 ntBASIC0.88□□□□□ -2.27
NCK1P16333 MIR5701-3-201ENST00000578890 82 ntBASIC0.88□□□□□ -2.27
NCK1P16333 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.88□□□□□ -2.27
NCK1P16333 MIR5701-1-201ENST00000585138 82 ntBASIC0.88□□□□□ -2.27
NCK1P16333 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
NCK1P16333 MIR5701-2-201ENST00000615634 82 ntBASIC0.88□□□□□ -2.27
NCK1P16333 AC015540.1-201ENST00000615828 501 ntBASIC0.88□□□□□ -2.27
NCK1P16333 SNORA27.1-201ENST00000362604 124 ntBASIC0.87□□□□□ -2.27
NCK1P16333 Y_RNA.265-201ENST00000364677 108 ntBASIC0.87□□□□□ -2.27
NCK1P16333 SNORD114-24-201ENST00000365029 72 ntBASIC0.87□□□□□ -2.27
NCK1P16333 Y_RNA.355-201ENST00000365462 98 ntBASIC0.87□□□□□ -2.27
NCK1P16333 SNORA20B-201ENST00000384220 132 ntBASIC0.87□□□□□ -2.27
NCK1P16333 SNORA80D-201ENST00000384488 135 ntBASIC0.87□□□□□ -2.27
NCK1P16333 Y_RNA.573-201ENST00000384763 105 ntBASIC0.87□□□□□ -2.27
NCK1P16333 EIF1P2-201ENST00000428233 350 ntBASIC0.87□□□□□ -2.27
NCK1P16333 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.87□□□□□ -2.27
NCK1P16333 RPL39P39-201ENST00000455840 151 ntBASIC0.87□□□□□ -2.27
NCK1P16333 AC048334.1-201ENST00000477975 159 ntBASIC0.87□□□□□ -2.27
NCK1P16333 RNU6-566P-201ENST00000516790 107 ntBASIC0.87□□□□□ -2.27
NCK1P16333 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.87□□□□□ -2.27
NCK1P16333 MIR6734-201ENST00000621166 68 ntBASIC0.87□□□□□ -2.27
NCK1P16333 AC106754.2-201ENST00000623006 233 ntBASIC0.87□□□□□ -2.27
NCK1P16333 AC090617.10-201ENST00000624308 134 ntBASIC0.87□□□□□ -2.27
NCK1P16333 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
NCK1P16333 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.86□□□□□ -2.27
NCK1P16333 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
NCK1P16333 RNU6-1145P-201ENST00000384246 107 ntBASIC0.86□□□□□ -2.27
NCK1P16333 Y_RNA.517-201ENST00000384551 106 ntBASIC0.86□□□□□ -2.27
NCK1P16333 MIR329-1-201ENST00000385028 80 ntBASIC0.86□□□□□ -2.27
NCK1P16333 AL355796.1-201ENST00000406706 323 ntBASIC0.86□□□□□ -2.27
NCK1P16333 AL445305.1-201ENST00000432577 575 ntBASIC0.86□□□□□ -2.27
NCK1P16333 AC002429.1-201ENST00000437672 148 ntBASIC0.86□□□□□ -2.27
NCK1P16333 UBE2V1P7-201ENST00000446395 340 ntBASIC0.86□□□□□ -2.27
NCK1P16333 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
NCK1P16333 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.86□□□□□ -2.27
NCK1P16333 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.86□□□□□ -2.27
NCK1P16333 RNU2-56P-201ENST00000516826 190 ntBASIC0.86□□□□□ -2.27
NCK1P16333 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.86□□□□□ -2.27
NCK1P16333 AC093023.1-201ENST00000547375 507 ntBASIC0.86□□□□□ -2.27
NCK1P16333 AC005828.6-201ENST00000606610 232 ntBASIC0.86□□□□□ -2.27
NCK1P16333 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
NCK1P16333 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
NCK1P16333 MIR520G-201ENST00000385064 90 ntBASIC0.85□□□□□ -2.27
NCK1P16333 U8.16-201ENST00000391279 133 ntBASIC0.85□□□□□ -2.27
NCK1P16333 RNU5A-5P-201ENST00000411054 116 ntBASIC0.85□□□□□ -2.27
NCK1P16333 ELOCP21-201ENST00000412558 336 ntBASIC0.85□□□□□ -2.27
NCK1P16333 AL139396.1-201ENST00000421137 167 ntBASIC0.85□□□□□ -2.27
NCK1P16333 CALM2P4-201ENST00000430810 426 ntBASIC0.85□□□□□ -2.27
NCK1P16333 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.85□□□□□ -2.27
NCK1P16333 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.85□□□□□ -2.27
NCK1P16333 RNA5SP20-201ENST00000515976 84 ntBASIC0.85□□□□□ -2.27
NCK1P16333 RNU6-1278P-201ENST00000516130 107 ntBASIC0.85□□□□□ -2.27
NCK1P16333 RNU6-917P-201ENST00000516294 104 ntBASIC0.85□□□□□ -2.27
NCK1P16333 RNU6-107P-201ENST00000516643 102 ntBASIC0.85□□□□□ -2.27
NCK1P16333 CBX3P8-201ENST00000532412 525 ntBASIC0.85□□□□□ -2.27
NCK1P16333 MIR4778-201ENST00000577635 80 ntBASIC0.85□□□□□ -2.27
NCK1P16333 AF250324.2-201ENST00000608299 610 ntBASIC0.85□□□□□ -2.27
NCK1P16333 MIR7111-201ENST00000619751 72 ntBASIC0.85□□□□□ -2.27
NCK1P16333 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
NCK1P16333 Y_RNA.41-201ENST00000362646 102 ntBASIC0.84□□□□□ -2.27
NCK1P16333 Y_RNA.106-201ENST00000363189 100 ntBASIC0.84□□□□□ -2.27
NCK1P16333 RNU6-1090P-201ENST00000364065 94 ntBASIC0.84□□□□□ -2.27
NCK1P16333 RNU6-593P-201ENST00000364716 112 ntBASIC0.84□□□□□ -2.27
NCK1P16333 Y_RNA.364-201ENST00000365532 101 ntBASIC0.84□□□□□ -2.27
NCK1P16333 RNU6-831P-201ENST00000384548 107 ntBASIC0.84□□□□□ -2.27
NCK1P16333 RNU6-306P-201ENST00000384617 107 ntBASIC0.84□□□□□ -2.27
NCK1P16333 MIR190B-201ENST00000401119 79 ntBASIC0.84□□□□□ -2.27
NCK1P16333 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.84□□□□□ -2.27
NCK1P16333 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.84□□□□□ -2.27
NCK1P16333 RNU6-1088P-201ENST00000516850 104 ntBASIC0.84□□□□□ -2.27
NCK1P16333 EIF1P4-201ENST00000572664 335 ntBASIC0.84□□□□□ -2.27
NCK1P16333 AC080078.3-201ENST00000605407 463 ntBASIC0.84□□□□□ -2.27
NCK1P16333 AC103591.3-201ENST00000608684 209 ntBASIC0.84□□□□□ -2.27
NCK1P16333 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
NCK1P16333 U4.5-201ENST00000617137 123 ntBASIC0.84□□□□□ -2.27
NCK1P16333 MIR3662-201ENST00000637030 95 ntBASIC0.84□□□□□ -2.27
NCK1P16333 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
NCK1P16333 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms