Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC055876.5-201ENST00000605667 259 ntBASIC-1.89□□□□□ -2.71
VCANP13611 AC016542.1-201ENST00000608259 493 ntBASIC-1.89□□□□□ -2.71
VCANP13611 MIR1248-201ENST00000629190 106 ntBASIC-1.89□□□□□ -2.71
VCANP13611 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.89□□□□□ -2.71
VCANP13611 RNU6-905P-201ENST00000384434 107 ntBASIC-1.89□□□□□ -2.71
VCANP13611 AC015818.7-201ENST00000428754 109 ntBASIC-1.89□□□□□ -2.71
VCANP13611 SUMO1P3-201ENST00000439961 304 ntBASIC-1.89□□□□□ -2.71
VCANP13611 AC087499.7-201ENST00000441958 109 ntBASIC-1.89□□□□□ -2.71
VCANP13611 RNU7-55P-201ENST00000459426 62 ntBASIC-1.89□□□□□ -2.71
VCANP13611 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.89□□□□□ -2.71
VCANP13611 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-1.89□□□□□ -2.71
VCANP13611 AL929325.1-201ENST00000603096 117 ntBASIC-1.89□□□□□ -2.71
VCANP13611 RNU6-743P-201ENST00000364151 106 ntBASIC-1.9□□□□□ -2.71
VCANP13611 AC018630.3-201ENST00000542637 96 ntBASIC-1.9□□□□□ -2.71
VCANP13611 AC234772.3-201ENST00000602277 528 ntBASIC-1.9□□□□□ -2.71
VCANP13611 AP001330.5-201ENST00000607176 411 ntBASIC-1.9□□□□□ -2.71
VCANP13611 SNORA72.2-201ENST00000365028 127 ntBASIC-1.9□□□□□ -2.71
VCANP13611 SNRPGP8-201ENST00000454064 226 ntBASIC-1.9□□□□□ -2.71
VCANP13611 RNU6-841P-201ENST00000383872 107 ntBASIC-1.9□□□□□ -2.71
VCANP13611 MIR548A2-201ENST00000384956 97 ntBASIC-1.9□□□□□ -2.71
VCANP13611 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.9□□□□□ -2.71
VCANP13611 MTCYBP8-201ENST00000422855 651 ntBASIC-1.9□□□□□ -2.71
VCANP13611 SNORA70.25-201ENST00000612741 95 ntBASIC-1.9□□□□□ -2.71
VCANP13611 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.9□□□□□ -2.71
VCANP13611 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.91□□□□□ -2.71
VCANP13611 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-1.91□□□□□ -2.71
VCANP13611 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.91□□□□□ -2.72
VCANP13611 MT-TP-201ENST00000387461 68 ntBASIC-1.91□□□□□ -2.72
VCANP13611 RNU2-8P-201ENST00000410727 190 ntBASIC-1.91□□□□□ -2.72
VCANP13611 RNU6-333P-201ENST00000459117 107 ntBASIC-1.91□□□□□ -2.72
VCANP13611 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.91□□□□□ -2.72
VCANP13611 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.92□□□□□ -2.72
VCANP13611 RNU6-934P-201ENST00000365154 107 ntBASIC-1.92□□□□□ -2.72
VCANP13611 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.92□□□□□ -2.72
VCANP13611 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-1.92□□□□□ -2.72
VCANP13611 SNORD123-201ENST00000459473 70 ntBASIC-1.92□□□□□ -2.72
VCANP13611 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.92□□□□□ -2.72
VCANP13611 RNU6-90P-201ENST00000606352 106 ntBASIC-1.92□□□□□ -2.72
VCANP13611 RN7SKP299-201ENST00000606679 301 ntBASIC-1.92□□□□□ -2.72
VCANP13611 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.92□□□□□ -2.72
VCANP13611 AL513423.1-201ENST00000621695 132 ntBASIC-1.92□□□□□ -2.72
VCANP13611 RNU6-726P-201ENST00000364680 107 ntBASIC-1.92□□□□□ -2.72
VCANP13611 SNORA22B-201ENST00000383876 138 ntBASIC-1.92□□□□□ -2.72
VCANP13611 RNU6-701P-201ENST00000384059 107 ntBASIC-1.92□□□□□ -2.72
VCANP13611 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-1.92□□□□□ -2.72
VCANP13611 SNORD115-10-201ENST00000365073 81 ntBASIC-1.93□□□□□ -2.72
VCANP13611 MIR10A-201ENST00000385043 110 ntBASIC-1.93□□□□□ -2.72
VCANP13611 AC098614.3-201ENST00000438957 440 ntBASIC-1.93□□□□□ -2.72
VCANP13611 RNU7-27P-201ENST00000459281 62 ntBASIC-1.93□□□□□ -2.72
VCANP13611 RNU6-720P-201ENST00000516363 108 ntBASIC-1.93□□□□□ -2.72
VCANP13611 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.93□□□□□ -2.72
VCANP13611 RNU6-1210P-201ENST00000363775 107 ntBASIC-1.93□□□□□ -2.72
VCANP13611 RNU2-51P-201ENST00000410708 197 ntBASIC-1.93□□□□□ -2.72
VCANP13611 AC010153.1-201ENST00000432862 727 ntBASIC-1.93□□□□□ -2.72
VCANP13611 RNU7-102P-201ENST00000458948 62 ntBASIC-1.93□□□□□ -2.72
VCANP13611 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-1.93□□□□□ -2.72
VCANP13611 AC137800.2-201ENST00000574375 120 ntBASIC-1.93□□□□□ -2.72
VCANP13611 MIR4771-2-201ENST00000577758 74 ntBASIC-1.93□□□□□ -2.72
VCANP13611 MIR4771-1-201ENST00000582617 74 ntBASIC-1.93□□□□□ -2.72
VCANP13611 RNU4-80P-201ENST00000363200 141 ntBASIC-1.93□□□□□ -2.72
VCANP13611 SNORD110-201ENST00000408189 75 ntBASIC-1.93□□□□□ -2.72
VCANP13611 BTF3L4P3-201ENST00000418879 476 ntBASIC-1.93□□□□□ -2.72
VCANP13611 DPRXP1-201ENST00000426312 460 ntBASIC-1.93□□□□□ -2.72
VCANP13611 AC116655.1-201ENST00000508324 901 ntBASIC-1.93□□□□□ -2.72
VCANP13611 AC025588.3-201ENST00000604182 274 ntBASIC-1.93□□□□□ -2.72
VCANP13611 AL392103.1-201ENST00000447000 198 ntBASIC-1.94□□□□□ -2.72
VCANP13611 TPTE2P5-203ENST00000458118 728 ntBASIC-1.94□□□□□ -2.72
VCANP13611 SNORD111.1-201ENST00000516421 86 ntBASIC-1.94□□□□□ -2.72
VCANP13611 RNU6-323P-201ENST00000521915 107 ntBASIC-1.94□□□□□ -2.72
VCANP13611 AC005771.1-201ENST00000585581 349 ntBASIC-1.94□□□□□ -2.72
VCANP13611 SNORD74.6-201ENST00000364796 70 ntBASIC-1.94□□□□□ -2.72
VCANP13611 RNU6-364P-201ENST00000384387 107 ntBASIC-1.94□□□□□ -2.72
VCANP13611 AL358072.1-201ENST00000604156 575 ntBASIC-1.94□□□□□ -2.72
VCANP13611 AL096861.1-201ENST00000610899 123 ntBASIC-1.94□□□□□ -2.72
VCANP13611 AC012531.4-201ENST00000616509 177 ntBASIC-1.94□□□□□ -2.72
VCANP13611 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.95□□□□□ -2.72
VCANP13611 PMCHL1-202ENST00000423102 261 ntBASIC-1.95□□□□□ -2.72
VCANP13611 AL592447.1-201ENST00000447592 540 ntBASIC-1.95□□□□□ -2.72
VCANP13611 DEFB108D-201ENST00000527787 222 ntBASIC-1.95□□□□□ -2.72
VCANP13611 AC253576.2-201ENST00000618815 580 ntBASIC-1.95□□□□□ -2.72
VCANP13611 AC097460.3-201ENST00000623099 442 ntBASIC-1.95□□□□□ -2.72
VCANP13611 RNU6-1274P-201ENST00000384557 107 ntBASIC-1.95□□□□□ -2.72
VCANP13611 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.95□□□□□ -2.72
VCANP13611 BNIP3P30-201ENST00000601184 574 ntBASIC-1.95□□□□□ -2.72
VCANP13611 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.95□□□□□ -2.72
VCANP13611 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.95□□□□□ -2.72
VCANP13611 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.95□□□□□ -2.72
VCANP13611 RNU6-975P-201ENST00000384296 105 ntBASIC-1.95□□□□□ -2.72
VCANP13611 RNU6-400P-201ENST00000391173 106 ntBASIC-1.95□□□□□ -2.72
VCANP13611 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.95□□□□□ -2.72
VCANP13611 MTND1P30-201ENST00000441241 901 ntBASIC-1.95□□□□□ -2.72
VCANP13611 RNU5A-7P-201ENST00000515979 116 ntBASIC-1.95□□□□□ -2.72
VCANP13611 MIR4639-201ENST00000584938 69 ntBASIC-1.95□□□□□ -2.72
VCANP13611 SNORD31B-201ENST00000364977 69 ntBASIC-1.96□□□□□ -2.72
VCANP13611 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.96□□□□□ -2.72
VCANP13611 RNU6-54P-201ENST00000365563 107 ntBASIC-1.96□□□□□ -2.72
VCANP13611 RNU6-1031P-201ENST00000384773 107 ntBASIC-1.96□□□□□ -2.72
VCANP13611 RNU6-484P-201ENST00000384016 107 ntBASIC-1.96□□□□□ -2.72
VCANP13611 RNU6-140P-201ENST00000384566 108 ntBASIC-1.96□□□□□ -2.72
VCANP13611 AC013828.1-201ENST00000481845 158 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms