Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2□□□□□ -2.09
PCNAP12004 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2□□□□□ -2.09
PCNAP12004 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2□□□□□ -2.09
PCNAP12004 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PCNAP12004 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PCNAP12004 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
PCNAP12004 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2□□□□□ -2.09
PCNAP12004 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PCNAP12004 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2□□□□□ -2.09
PCNAP12004 RNU6-1266P-201ENST00000362794 105 ntBASIC1.99□□□□□ -2.09
PCNAP12004 SNORD115-30-201ENST00000364117 82 ntBASIC1.99□□□□□ -2.09
PCNAP12004 Y_RNA.222-201ENST00000364264 102 ntBASIC1.99□□□□□ -2.09
PCNAP12004 Y_RNA.230-201ENST00000364348 109 ntBASIC1.99□□□□□ -2.09
PCNAP12004 MIR215-201ENST00000384858 110 ntBASIC1.99□□□□□ -2.09
PCNAP12004 RNU2-54P-201ENST00000410299 190 ntBASIC1.99□□□□□ -2.09
PCNAP12004 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PCNAP12004 AC073910.1-201ENST00000445047 438 ntBASIC1.99□□□□□ -2.09
PCNAP12004 LINC01399-202ENST00000458450 244 ntBASIC1.99□□□□□ -2.09
PCNAP12004 RNU6-635P-201ENST00000516651 102 ntBASIC1.99□□□□□ -2.09
PCNAP12004 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.99□□□□□ -2.09
PCNAP12004 MIR5094-201ENST00000578766 85 ntBASIC1.99□□□□□ -2.09
PCNAP12004 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
PCNAP12004 AC136443.5-201ENST00000603741 370 ntBASIC1.99□□□□□ -2.09
PCNAP12004 AC022441.3-201ENST00000605737 136 ntBASIC1.99□□□□□ -2.09
PCNAP12004 AC011373.1-201ENST00000607270 237 ntBASIC1.99□□□□□ -2.09
PCNAP12004 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.99□□□□□ -2.09
PCNAP12004 AL590808.1-201ENST00000618696 141 ntBASIC1.99□□□□□ -2.09
PCNAP12004 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PCNAP12004 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
PCNAP12004 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
PCNAP12004 SNORD81.1-201ENST00000363064 77 ntBASIC1.98□□□□□ -2.09
PCNAP12004 RNU6-238P-201ENST00000363313 106 ntBASIC1.98□□□□□ -2.09
PCNAP12004 SNORD113-8-201ENST00000363497 74 ntBASIC1.98□□□□□ -2.09
PCNAP12004 RNU6-770P-201ENST00000363929 105 ntBASIC1.98□□□□□ -2.09
PCNAP12004 RNU6-324P-201ENST00000363957 106 ntBASIC1.98□□□□□ -2.09
PCNAP12004 RNU1-96P-201ENST00000364163 162 ntBASIC1.98□□□□□ -2.09
PCNAP12004 Y_RNA.331-201ENST00000365267 102 ntBASIC1.98□□□□□ -2.09
PCNAP12004 RNU6-407P-201ENST00000365280 104 ntBASIC1.98□□□□□ -2.09
PCNAP12004 Y_RNA.462-201ENST00000384268 102 ntBASIC1.98□□□□□ -2.09
PCNAP12004 SNORA67.3-201ENST00000384366 140 ntBASIC1.98□□□□□ -2.09
PCNAP12004 SNORA64-201ENST00000384674 134 ntBASIC1.98□□□□□ -2.09
PCNAP12004 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PCNAP12004 AL023284.1-201ENST00000403956 276 ntBASIC1.98□□□□□ -2.09
PCNAP12004 RNA5SP425-201ENST00000410336 112 ntBASIC1.98□□□□□ -2.09
PCNAP12004 HMGN2P19-201ENST00000425149 265 ntBASIC1.98□□□□□ -2.09
PCNAP12004 AL121890.1-201ENST00000435457 205 ntBASIC1.98□□□□□ -2.09
PCNAP12004 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.98□□□□□ -2.09
PCNAP12004 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.98□□□□□ -2.09
PCNAP12004 DYNLT3P2-201ENST00000442517 295 ntBASIC1.98□□□□□ -2.09
PCNAP12004 MTND5P22-201ENST00000458380 195 ntBASIC1.98□□□□□ -2.09
PCNAP12004 HMGB3P17-201ENST00000504195 649 ntBASIC1.98□□□□□ -2.09
PCNAP12004 Y_RNA.713-201ENST00000517013 96 ntBASIC1.98□□□□□ -2.09
PCNAP12004 AC005786.1-201ENST00000588553 154 ntBASIC1.98□□□□□ -2.09
PCNAP12004 Y_RNA.783-201ENST00000613546 102 ntBASIC1.98□□□□□ -2.09
PCNAP12004 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.98□□□□□ -2.09
PCNAP12004 AC064859.1-201ENST00000624741 174 ntBASIC1.98□□□□□ -2.09
PCNAP12004 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PCNAP12004 Y_RNA.243-201ENST00000364481 109 ntBASIC1.97□□□□□ -2.09
PCNAP12004 SNORD63-201ENST00000384262 68 ntBASIC1.97□□□□□ -2.09
PCNAP12004 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PCNAP12004 SNORD115-46-201ENST00000390982 71 ntBASIC1.97□□□□□ -2.09
PCNAP12004 MIR548F4-201ENST00000408515 105 ntBASIC1.97□□□□□ -2.09
PCNAP12004 RNU5A-5P-201ENST00000411054 116 ntBASIC1.97□□□□□ -2.09
PCNAP12004 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.97□□□□□ -2.09
PCNAP12004 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.97□□□□□ -2.09
PCNAP12004 MIR1273D-201ENST00000577266 86 ntBASIC1.97□□□□□ -2.09
PCNAP12004 MIR3145-201ENST00000580727 82 ntBASIC1.97□□□□□ -2.09
PCNAP12004 AC006380.1-201ENST00000603598 186 ntBASIC1.97□□□□□ -2.09
PCNAP12004 AC012493.3-201ENST00000604494 112 ntBASIC1.97□□□□□ -2.09
PCNAP12004 AL353149.1-201ENST00000610667 244 ntBASIC1.97□□□□□ -2.09
PCNAP12004 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
PCNAP12004 ZNF702P-202ENST00000434269 1966 ntBASIC1.96□□□□□ -2.1
PCNAP12004 RNU6-1309P-201ENST00000363305 108 ntBASIC1.96□□□□□ -2.1
PCNAP12004 RNU6-21P-201ENST00000384710 107 ntBASIC1.96□□□□□ -2.1
PCNAP12004 AL031003.1-201ENST00000404229 172 ntBASIC1.96□□□□□ -2.1
PCNAP12004 SNORA3.2-201ENST00000408221 125 ntBASIC1.96□□□□□ -2.1
PCNAP12004 RNU6-1186P-201ENST00000410429 97 ntBASIC1.96□□□□□ -2.1
PCNAP12004 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.96□□□□□ -2.1
PCNAP12004 RPS27P22-201ENST00000478056 241 ntBASIC1.96□□□□□ -2.1
PCNAP12004 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.96□□□□□ -2.1
PCNAP12004 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.96□□□□□ -2.1
PCNAP12004 AC010598.1-201ENST00000510378 103 ntBASIC1.96□□□□□ -2.1
PCNAP12004 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.96□□□□□ -2.1
PCNAP12004 AC008269.2-201ENST00000561915 1105 ntBASIC1.96□□□□□ -2.1
PCNAP12004 MIR4299-201ENST00000577899 72 ntBASIC1.96□□□□□ -2.1
PCNAP12004 AC005828.6-201ENST00000606610 232 ntBASIC1.96□□□□□ -2.1
PCNAP12004 SNORA27.1-201ENST00000362604 124 ntBASIC1.95□□□□□ -2.1
PCNAP12004 snoU2_19.2-201ENST00000363024 80 ntBASIC1.95□□□□□ -2.1
PCNAP12004 Y_RNA.152-201ENST00000363578 100 ntBASIC1.95□□□□□ -2.1
PCNAP12004 Y_RNA.329-201ENST00000365209 107 ntBASIC1.95□□□□□ -2.1
PCNAP12004 SNORA48.1-201ENST00000390879 135 ntBASIC1.95□□□□□ -2.1
PCNAP12004 RNU6-1109P-201ENST00000391187 107 ntBASIC1.95□□□□□ -2.1
PCNAP12004 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.95□□□□□ -2.1
PCNAP12004 RN7SKP223-201ENST00000410582 62 ntBASIC1.95□□□□□ -2.1
PCNAP12004 AL139156.1-201ENST00000412785 841 ntBASIC1.95□□□□□ -2.1
PCNAP12004 AL158823.1-201ENST00000418441 478 ntBASIC1.95□□□□□ -2.1
PCNAP12004 RPL23AP6-201ENST00000446637 472 ntBASIC1.95□□□□□ -2.1
PCNAP12004 AC005042.3-201ENST00000453230 174 ntBASIC1.95□□□□□ -2.1
PCNAP12004 HSPE1P25-201ENST00000455484 251 ntBASIC1.95□□□□□ -2.1
PCNAP12004 AC010409.1-201ENST00000487382 476 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms