Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNU6-486P-201ENST00000363116 107 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 Y_RNA.117-201ENST00000363294 101 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 RNU5F-3P-201ENST00000363767 117 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 SNORD32B-201ENST00000364460 84 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 RNU6-326P-201ENST00000365480 107 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 SNORA67.2-201ENST00000384300 149 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 RNU6-1274P-201ENST00000384557 107 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HOXC6P09630 RNA5SP475-201ENST00000410568 110 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 RPL23AP36-201ENST00000413895 458 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXC6P09630 RNA5SP82-201ENST00000516707 92 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 RNU6-1098P-201ENST00000516772 96 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 CYCSP23-201ENST00000519781 313 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 AC130289.1-201ENST00000577321 73 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 AL109918.3-201ENST00000603072 338 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 AL713866.2-201ENST00000603579 219 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 MIR7157-201ENST00000635801 60 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 MIR3674-201ENST00000636576 68 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXC6P09630 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXC6P09630 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXC6P09630 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HOXC6P09630 AC009487.4-201ENST00000624969 3585 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 RNU6-545P-201ENST00000362681 104 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 RNU6-740P-201ENST00000364734 105 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 Y_RNA.515-201ENST00000384535 112 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 MIR524-201ENST00000385242 87 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 SNORA53-201ENST00000391141 249 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 SNORA40.18-201ENST00000391200 128 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 MTCO1P5-201ENST00000433573 344 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 POLR2KP2-201ENST00000438155 177 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 AC011753.1-201ENST00000451001 220 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXC6P09630 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXC6P09630 AC107393.1-201ENST00000512403 346 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 RNU6-138P-201ENST00000515952 107 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 RNU6-155P-201ENST00000516347 100 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 RNU6-344P-201ENST00000516635 111 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXC6P09630 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXC6P09630 AC026470.2-201ENST00000561492 181 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 SNORD11B-201ENST00000607707 90 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.25□□□□□ -2.05
HOXC6P09630 U2.14-201ENST00000615943 113 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.25□□□□□ -2.05
HOXC6P09630 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HOXC6P09630 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.25□□□□□ -2.05
HOXC6P09630 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HOXC6P09630 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXC6P09630 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.24□□□□□ -2.05
HOXC6P09630 Y_RNA.44-201ENST00000362676 108 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 RNU6-1305P-201ENST00000364353 104 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 MIR548B-201ENST00000385247 97 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 AC108667.1-201ENST00000428618 249 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
HOXC6P09630 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXC6P09630 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 RNU6-965P-201ENST00000516721 96 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 SCARNA3-201ENST00000517097 143 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 MIR3683-201ENST00000580847 82 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 BX284668.6-201ENST00000606899 438 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 AL590240.4-201ENST00000616908 390 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXC6P09630 MIR203B-201ENST00000636080 86 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 AC068205.3-201ENST00000636385 468 ntBASIC2.24□□□□□ -2.05
HOXC6P09630 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.23□□□□□ -2.05
HOXC6P09630 MIR410-201ENST00000362222 80 ntBASIC2.23□□□□□ -2.05
HOXC6P09630 Y_RNA.274-201ENST00000364714 101 ntBASIC2.23□□□□□ -2.05
HOXC6P09630 RNU6-662P-201ENST00000384253 104 ntBASIC2.23□□□□□ -2.05
HOXC6P09630 SNORA17.3-201ENST00000391159 129 ntBASIC2.23□□□□□ -2.05
HOXC6P09630 SNORD58.1-201ENST00000391313 66 ntBASIC2.23□□□□□ -2.05
HOXC6P09630 AL390729.2-201ENST00000416137 156 ntBASIC2.23□□□□□ -2.05
HOXC6P09630 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXC6P09630 AC005042.3-201ENST00000453230 174 ntBASIC2.23□□□□□ -2.05
HOXC6P09630 AC091959.1-201ENST00000495857 238 ntBASIC2.23□□□□□ -2.05
HOXC6P09630 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.23□□□□□ -2.05
HOXC6P09630 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXC6P09630 RNU5F-4P-201ENST00000516581 114 ntBASIC2.23□□□□□ -2.05
HOXC6P09630 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXC6P09630 MIR5089-201ENST00000580047 84 ntBASIC2.23□□□□□ -2.05
HOXC6P09630 DEFB117-201ENST00000602356 141 ntBASIC2.23□□□□□ -2.05
HOXC6P09630 AC009779.6-201ENST00000603972 165 ntBASIC2.23□□□□□ -2.05
HOXC6P09630 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.23□□□□□ -2.05
HOXC6P09630 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HOXC6P09630 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXC6P09630 SNORA25.1-201ENST00000362326 128 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 RNU4-80P-201ENST00000363200 141 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 Y_RNA.329-201ENST00000365209 107 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 RNU6-1310P-201ENST00000384153 107 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 MIR29B2-201ENST00000385055 81 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 RNU2-54P-201ENST00000410299 190 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 RNU7-14P-201ENST00000459331 62 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 ATP5EP1-201ENST00000510257 156 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXC6P09630 RNU6-1053P-201ENST00000515930 101 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 SNORD116-28-201ENST00000516123 91 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 RNU6-586P-201ENST00000517265 104 ntBASIC2.22□□□□□ -2.05
HOXC6P09630 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms