Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.9□□□□□ -2.27
CD74P04233 AC005014.2-201ENST00000607795 599 ntBASIC0.9□□□□□ -2.27
CD74P04233 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.89□□□□□ -2.27
CD74P04233 RNU6-879P-201ENST00000364328 108 ntBASIC0.89□□□□□ -2.27
CD74P04233 Y_RNA.490-201ENST00000384413 102 ntBASIC0.89□□□□□ -2.27
CD74P04233 RNU6-700P-201ENST00000391043 107 ntBASIC0.89□□□□□ -2.27
CD74P04233 RNU1-139P-201ENST00000391307 165 ntBASIC0.89□□□□□ -2.27
CD74P04233 MRPL42P3-201ENST00000401492 326 ntBASIC0.89□□□□□ -2.27
CD74P04233 RN7SKP200-201ENST00000410564 320 ntBASIC0.89□□□□□ -2.27
CD74P04233 MTND3P8-201ENST00000412909 339 ntBASIC0.89□□□□□ -2.27
CD74P04233 UQCRBP2-201ENST00000447827 297 ntBASIC0.89□□□□□ -2.27
CD74P04233 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.89□□□□□ -2.27
CD74P04233 RPL7P42-201ENST00000481005 679 ntBASIC0.89□□□□□ -2.27
CD74P04233 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
CD74P04233 UBL5P1-201ENST00000507979 193 ntBASIC0.89□□□□□ -2.27
CD74P04233 RNA5SP102-201ENST00000516865 106 ntBASIC0.89□□□□□ -2.27
CD74P04233 RNA5SP404-201ENST00000517118 132 ntBASIC0.89□□□□□ -2.27
CD74P04233 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.89□□□□□ -2.27
CD74P04233 AC125232.2-201ENST00000592457 143 ntBASIC0.89□□□□□ -2.27
CD74P04233 AC068790.6-201ENST00000602558 258 ntBASIC0.89□□□□□ -2.27
CD74P04233 AC106754.2-201ENST00000623006 233 ntBASIC0.89□□□□□ -2.27
CD74P04233 RNU6-874P-201ENST00000362390 105 ntBASIC0.88□□□□□ -2.27
CD74P04233 RNA5SP361-201ENST00000362686 118 ntBASIC0.88□□□□□ -2.27
CD74P04233 RNY1P16-201ENST00000363063 111 ntBASIC0.88□□□□□ -2.27
CD74P04233 Y_RNA.116-201ENST00000363292 103 ntBASIC0.88□□□□□ -2.27
CD74P04233 RNU1-124P-201ENST00000363861 145 ntBASIC0.88□□□□□ -2.27
CD74P04233 Y_RNA.796-201ENST00000364268 102 ntBASIC0.88□□□□□ -2.27
CD74P04233 Y_RNA.799-201ENST00000364992 102 ntBASIC0.88□□□□□ -2.27
CD74P04233 RNU6-601P-201ENST00000384540 107 ntBASIC0.88□□□□□ -2.27
CD74P04233 MIR548K-201ENST00000408406 116 ntBASIC0.88□□□□□ -2.27
CD74P04233 AC074085.1-201ENST00000413598 418 ntBASIC0.88□□□□□ -2.27
CD74P04233 MRPS10P1-201ENST00000448483 130 ntBASIC0.88□□□□□ -2.27
CD74P04233 AC107399.1-201ENST00000451226 265 ntBASIC0.88□□□□□ -2.27
CD74P04233 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.88□□□□□ -2.27
CD74P04233 U8.22-201ENST00000459141 133 ntBASIC0.88□□□□□ -2.27
CD74P04233 AC018710.1-201ENST00000506509 158 ntBASIC0.88□□□□□ -2.27
CD74P04233 SNORD116-28-201ENST00000516123 91 ntBASIC0.88□□□□□ -2.27
CD74P04233 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.88□□□□□ -2.27
CD74P04233 AL512310.8-201ENST00000550183 120 ntBASIC0.88□□□□□ -2.27
CD74P04233 AC090617.3-201ENST00000573670 475 ntBASIC0.88□□□□□ -2.27
CD74P04233 MIR4295-201ENST00000585286 85 ntBASIC0.88□□□□□ -2.27
CD74P04233 AC011712.1-201ENST00000588959 234 ntBASIC0.88□□□□□ -2.27
CD74P04233 AC009229.3-201ENST00000608056 282 ntBASIC0.88□□□□□ -2.27
CD74P04233 AL357075.2-201ENST00000614906 189 ntBASIC0.88□□□□□ -2.27
CD74P04233 RNU6-1123P-201ENST00000362347 106 ntBASIC0.87□□□□□ -2.27
CD74P04233 RNU6-407P-201ENST00000365280 104 ntBASIC0.87□□□□□ -2.27
CD74P04233 Y_RNA.358-201ENST00000365491 99 ntBASIC0.87□□□□□ -2.27
CD74P04233 Y_RNA.557-201ENST00000384680 107 ntBASIC0.87□□□□□ -2.27
CD74P04233 MIR329-1-201ENST00000385028 80 ntBASIC0.87□□□□□ -2.27
CD74P04233 MIR518E-201ENST00000385252 88 ntBASIC0.87□□□□□ -2.27
CD74P04233 FCF1P9-201ENST00000412546 282 ntBASIC0.87□□□□□ -2.27
CD74P04233 EIF1P2-201ENST00000428233 350 ntBASIC0.87□□□□□ -2.27
CD74P04233 AC092423.1-201ENST00000430165 186 ntBASIC0.87□□□□□ -2.27
CD74P04233 RPL23AP50-201ENST00000434149 455 ntBASIC0.87□□□□□ -2.27
CD74P04233 STAG3L5P-204ENST00000443759 179 ntBASIC0.87□□□□□ -2.27
CD74P04233 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.87□□□□□ -2.27
CD74P04233 MTND3P10-201ENST00000450967 341 ntBASIC0.87□□□□□ -2.27
CD74P04233 RN7SKP88-201ENST00000516847 250 ntBASIC0.87□□□□□ -2.27
CD74P04233 Y_RNA.708-201ENST00000516950 96 ntBASIC0.87□□□□□ -2.27
CD74P04233 AC022868.1-201ENST00000517767 391 ntBASIC0.87□□□□□ -2.27
CD74P04233 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.87□□□□□ -2.27
CD74P04233 AL121579.1-201ENST00000555129 305 ntBASIC0.87□□□□□ -2.27
CD74P04233 MIR5701-3-201ENST00000578890 82 ntBASIC0.87□□□□□ -2.27
CD74P04233 MIR5701-1-201ENST00000585138 82 ntBASIC0.87□□□□□ -2.27
CD74P04233 AL390123.1-201ENST00000603216 237 ntBASIC0.87□□□□□ -2.27
CD74P04233 7SK.8-201ENST00000612110 250 ntBASIC0.87□□□□□ -2.27
CD74P04233 7SK.11-201ENST00000615477 250 ntBASIC0.87□□□□□ -2.27
CD74P04233 MIR5701-2-201ENST00000615634 82 ntBASIC0.87□□□□□ -2.27
CD74P04233 7SK.13-201ENST00000622040 250 ntBASIC0.87□□□□□ -2.27
CD74P04233 AC091895.1-201ENST00000624494 256 ntBASIC0.87□□□□□ -2.27
CD74P04233 SNORD3E-202ENST00000627253 216 ntBASIC0.87□□□□□ -2.27
CD74P04233 AC018630.2-201ENST00000534866 2403 ntBASIC0.86□□□□□ -2.27
CD74P04233 Y_RNA.267-201ENST00000364679 109 ntBASIC0.86□□□□□ -2.27
CD74P04233 Y_RNA.364-201ENST00000365532 101 ntBASIC0.86□□□□□ -2.27
CD74P04233 Y_RNA.404-201ENST00000383978 102 ntBASIC0.86□□□□□ -2.27
CD74P04233 SNORA20B-201ENST00000384220 132 ntBASIC0.86□□□□□ -2.27
CD74P04233 Y_RNA.508-201ENST00000384502 114 ntBASIC0.86□□□□□ -2.27
CD74P04233 AL355796.1-201ENST00000406706 323 ntBASIC0.86□□□□□ -2.27
CD74P04233 AL034345.1-201ENST00000407768 123 ntBASIC0.86□□□□□ -2.27
CD74P04233 MTCYBP10-201ENST00000424905 650 ntBASIC0.86□□□□□ -2.27
CD74P04233 MTND1P4-201ENST00000435196 415 ntBASIC0.86□□□□□ -2.27
CD74P04233 AC010598.1-201ENST00000510378 103 ntBASIC0.86□□□□□ -2.27
CD74P04233 AC046134.1-201ENST00000514454 666 ntBASIC0.86□□□□□ -2.27
CD74P04233 RNU7-172P-201ENST00000517125 64 ntBASIC0.86□□□□□ -2.27
CD74P04233 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.86□□□□□ -2.27
CD74P04233 AC004584.2-201ENST00000570407 410 ntBASIC0.86□□□□□ -2.27
CD74P04233 AC136932.1-201ENST00000574771 208 ntBASIC0.86□□□□□ -2.27
CD74P04233 MIR4778-201ENST00000577635 80 ntBASIC0.86□□□□□ -2.27
CD74P04233 AC060780.3-201ENST00000589464 80 ntBASIC0.86□□□□□ -2.27
CD74P04233 SNORD114-21-201ENST00000606412 72 ntBASIC0.86□□□□□ -2.27
CD74P04233 PISRT1.1-201ENST00000616930 107 ntBASIC0.86□□□□□ -2.27
CD74P04233 AC139792.2-201ENST00000624218 587 ntBASIC0.86□□□□□ -2.27
CD74P04233 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.86□□□□□ -2.27
CD74P04233 AC068647.2-201ENST00000637380 353 ntBASIC0.86□□□□□ -2.27
CD74P04233 AC073544.1-201ENST00000600110 1595 ntBASIC0.86□□□□□ -2.27
CD74P04233 Y_RNA.88-201ENST00000363029 99 ntBASIC0.85□□□□□ -2.27
CD74P04233 Y_RNA.191-201ENST00000363972 113 ntBASIC0.85□□□□□ -2.27
CD74P04233 Y_RNA.269-201ENST00000364685 89 ntBASIC0.85□□□□□ -2.27
CD74P04233 Y_RNA.498-201ENST00000384460 102 ntBASIC0.85□□□□□ -2.27
CD74P04233 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms