Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.89□□□□□ -2.55
APOBP04114 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.89□□□□□ -2.55
APOBP04114 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.89□□□□□ -2.55
APOBP04114 AC020891.4-201ENST00000605745 93 ntBASIC-0.89□□□□□ -2.55
APOBP04114 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.89□□□□□ -2.55
APOBP04114 AL162376.1-201ENST00000624117 175 ntBASIC-0.89□□□□□ -2.55
APOBP04114 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.89□□□□□ -2.55
APOBP04114 RNU6-142P-201ENST00000384019 107 ntBASIC-0.89□□□□□ -2.55
APOBP04114 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.89□□□□□ -2.55
APOBP04114 RNU6-504P-201ENST00000516568 104 ntBASIC-0.89□□□□□ -2.55
APOBP04114 AP001372.4-201ENST00000524889 472 ntBASIC-0.89□□□□□ -2.55
APOBP04114 MIR1253-201ENST00000408273 105 ntBASIC-0.89□□□□□ -2.55
APOBP04114 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.89□□□□□ -2.55
APOBP04114 AC004217.3-201ENST00000551552 878 ntBASIC-0.89□□□□□ -2.55
APOBP04114 AC008521.1-201ENST00000587471 187 ntBASIC-0.89□□□□□ -2.55
APOBP04114 BNIP3P39-201ENST00000601077 554 ntBASIC-0.89□□□□□ -2.55
APOBP04114 AC010205.1-201ENST00000616668 449 ntBASIC-0.89□□□□□ -2.55
APOBP04114 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.9□□□□□ -2.55
APOBP04114 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.9□□□□□ -2.55
APOBP04114 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.9□□□□□ -2.55
APOBP04114 MIR4520-1-201ENST00000582609 70 ntBASIC-0.9□□□□□ -2.55
APOBP04114 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.9□□□□□ -2.55
APOBP04114 AC122133.1-201ENST00000613964 233 ntBASIC-0.9□□□□□ -2.55
APOBP04114 AL159153.1-201ENST00000619688 317 ntBASIC-0.9□□□□□ -2.55
APOBP04114 AC027279.3-201ENST00000625055 122 ntBASIC-0.9□□□□□ -2.55
APOBP04114 MCFD2P1-201ENST00000417812 300 ntBASIC-0.9□□□□□ -2.55
APOBP04114 Z99497.2-201ENST00000603634 310 ntBASIC-0.9□□□□□ -2.55
APOBP04114 BNIP3P9-201ENST00000603714 553 ntBASIC-0.9□□□□□ -2.55
APOBP04114 AC011458.1-201ENST00000604034 617 ntBASIC-0.9□□□□□ -2.55
APOBP04114 ZNF299P-201ENST00000406845 1804 ntBASIC-0.9□□□□□ -2.55
APOBP04114 SNORA33-201ENST00000363664 130 ntBASIC-0.91□□□□□ -2.55
APOBP04114 MIR548K-201ENST00000408406 116 ntBASIC-0.91□□□□□ -2.55
APOBP04114 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.91□□□□□ -2.55
APOBP04114 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.91□□□□□ -2.55
APOBP04114 AP001189.2-201ENST00000527320 189 ntBASIC-0.91□□□□□ -2.55
APOBP04114 AC103996.1-201ENST00000555468 102 ntBASIC-0.91□□□□□ -2.55
APOBP04114 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.91□□□□□ -2.55
APOBP04114 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.91□□□□□ -2.55
APOBP04114 AC124016.2-201ENST00000610058 665 ntBASIC-0.91□□□□□ -2.55
APOBP04114 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.91□□□□□ -2.55
APOBP04114 MIR517B-201ENST00000385102 67 ntBASIC-0.91□□□□□ -2.55
APOBP04114 MTND3P20-201ENST00000407663 186 ntBASIC-0.91□□□□□ -2.55
APOBP04114 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.91□□□□□ -2.55
APOBP04114 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.91□□□□□ -2.55
APOBP04114 AC074085.1-201ENST00000413598 418 ntBASIC-0.91□□□□□ -2.55
APOBP04114 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.91□□□□□ -2.56
APOBP04114 AP003733.2-201ENST00000529409 171 ntBASIC-0.91□□□□□ -2.56
APOBP04114 AC010999.1-201ENST00000611856 324 ntBASIC-0.91□□□□□ -2.56
APOBP04114 MIR518B-201ENST00000385127 83 ntBASIC-0.91□□□□□ -2.56
APOBP04114 RNU4-22P-201ENST00000411058 166 ntBASIC-0.91□□□□□ -2.56
APOBP04114 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.91□□□□□ -2.56
APOBP04114 AC008134.1-201ENST00000420943 193 ntBASIC-0.91□□□□□ -2.56
APOBP04114 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.91□□□□□ -2.56
APOBP04114 SNORA59B-202ENST00000578183 701 ntBASIC-0.91□□□□□ -2.56
APOBP04114 MIR466-201ENST00000580653 84 ntBASIC-0.91□□□□□ -2.56
APOBP04114 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.91□□□□□ -2.56
APOBP04114 RNU6-540P-201ENST00000384622 101 ntBASIC-0.92□□□□□ -2.56
APOBP04114 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.92□□□□□ -2.56
APOBP04114 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.92□□□□□ -2.56
APOBP04114 AL365338.1-201ENST00000422282 858 ntBASIC-0.92□□□□□ -2.56
APOBP04114 BX276092.1-201ENST00000427368 251 ntBASIC-0.92□□□□□ -2.56
APOBP04114 AC005345.1-201ENST00000431868 217 ntBASIC-0.92□□□□□ -2.56
APOBP04114 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.92□□□□□ -2.56
APOBP04114 AC113347.3-201ENST00000509113 148 ntBASIC-0.92□□□□□ -2.56
APOBP04114 RNU7-28P-201ENST00000516759 62 ntBASIC-0.92□□□□□ -2.56
APOBP04114 AC009994.1-201ENST00000606889 253 ntBASIC-0.92□□□□□ -2.56
APOBP04114 RNU6-726P-201ENST00000364680 107 ntBASIC-0.92□□□□□ -2.56
APOBP04114 AC098592.1-201ENST00000419352 333 ntBASIC-0.92□□□□□ -2.56
APOBP04114 RMST_7.1-201ENST00000621935 268 ntBASIC-0.92□□□□□ -2.56
APOBP04114 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.92□□□□□ -2.56
APOBP04114 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.92□□□□□ -2.56
APOBP04114 AL445584.3-201ENST00000617173 78 ntBASIC-0.92□□□□□ -2.56
APOBP04114 AC244669.1-204ENST00000621564 178 ntBASIC-0.92□□□□□ -2.56
APOBP04114 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.93□□□□□ -2.56
APOBP04114 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.93□□□□□ -2.56
APOBP04114 MIR520C-201ENST00000385005 87 ntBASIC-0.93□□□□□ -2.56
APOBP04114 MIR125B2-201ENST00000385128 89 ntBASIC-0.93□□□□□ -2.56
APOBP04114 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.93□□□□□ -2.56
APOBP04114 ZNF114P1-201ENST00000453500 292 ntBASIC-0.93□□□□□ -2.56
APOBP04114 AC104629.1-201ENST00000494226 508 ntBASIC-0.93□□□□□ -2.56
APOBP04114 SUMO1P1-201ENST00000497904 306 ntBASIC-0.93□□□□□ -2.56
APOBP04114 AL442663.2-201ENST00000554385 511 ntBASIC-0.93□□□□□ -2.56
APOBP04114 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.93□□□□□ -2.56
APOBP04114 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.93□□□□□ -2.56
APOBP04114 SNORD115-27-201ENST00000364430 82 ntBASIC-0.93□□□□□ -2.56
APOBP04114 SNORD115-44-201ENST00000365391 82 ntBASIC-0.93□□□□□ -2.56
APOBP04114 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.93□□□□□ -2.56
APOBP04114 MIR549A-201ENST00000385268 96 ntBASIC-0.93□□□□□ -2.56
APOBP04114 MTCYBP2-201ENST00000407745 171 ntBASIC-0.93□□□□□ -2.56
APOBP04114 AC244670.1-201ENST00000436879 112 ntBASIC-0.93□□□□□ -2.56
APOBP04114 AL031667.1-201ENST00000440222 725 ntBASIC-0.93□□□□□ -2.56
APOBP04114 AL122001.1-201ENST00000457027 370 ntBASIC-0.93□□□□□ -2.56
APOBP04114 RNA5SP484-201ENST00000458857 111 ntBASIC-0.93□□□□□ -2.56
APOBP04114 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.93□□□□□ -2.56
APOBP04114 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.93□□□□□ -2.56
APOBP04114 MTND5P18-201ENST00000445624 1801 ntBASIC-0.93□□□□□ -2.56
APOBP04114 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.93□□□□□ -2.56
APOBP04114 RNU6-166P-201ENST00000384371 107 ntBASIC-0.93□□□□□ -2.56
APOBP04114 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.93□□□□□ -2.56
APOBP04114 MIR1257-201ENST00000408490 117 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms