Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SNORD68-201ENST00000363214 84 ntBASIC0.1□□□□□ -2.39
APOA1P02647 RNU4-66P-201ENST00000365199 138 ntBASIC0.1□□□□□ -2.39
APOA1P02647 Y_RNA.381-201ENST00000365666 102 ntBASIC0.1□□□□□ -2.39
APOA1P02647 RNU5A-6P-201ENST00000384136 116 ntBASIC0.1□□□□□ -2.39
APOA1P02647 RNU6-790P-201ENST00000384479 105 ntBASIC0.1□□□□□ -2.39
APOA1P02647 SNORA2B-201ENST00000384583 137 ntBASIC0.1□□□□□ -2.39
APOA1P02647 MIR573-201ENST00000384964 99 ntBASIC0.1□□□□□ -2.39
APOA1P02647 MIR520G-201ENST00000385064 90 ntBASIC0.1□□□□□ -2.39
APOA1P02647 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.1□□□□□ -2.39
APOA1P02647 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.1□□□□□ -2.39
APOA1P02647 RPS29P1-201ENST00000465274 159 ntBASIC0.1□□□□□ -2.39
APOA1P02647 AC074133.1-201ENST00000515696 183 ntBASIC0.1□□□□□ -2.39
APOA1P02647 RNA5SP401-201ENST00000515920 127 ntBASIC0.1□□□□□ -2.39
APOA1P02647 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.1□□□□□ -2.39
APOA1P02647 MIR4764-201ENST00000580680 88 ntBASIC0.1□□□□□ -2.39
APOA1P02647 PIGPP4-201ENST00000584447 307 ntBASIC0.1□□□□□ -2.39
APOA1P02647 SNORA27.1-201ENST00000362604 124 ntBASIC0.09□□□□□ -2.4
APOA1P02647 RNU6-654P-201ENST00000364373 107 ntBASIC0.09□□□□□ -2.4
APOA1P02647 SNORA26.8-201ENST00000391306 124 ntBASIC0.09□□□□□ -2.4
APOA1P02647 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
APOA1P02647 AC243428.1-201ENST00000421099 264 ntBASIC0.09□□□□□ -2.4
APOA1P02647 RPS3AP17-201ENST00000472594 777 ntBASIC0.09□□□□□ -2.4
APOA1P02647 Y_RNA.654-201ENST00000497848 106 ntBASIC0.09□□□□□ -2.4
APOA1P02647 RNU6-496P-201ENST00000516145 99 ntBASIC0.09□□□□□ -2.4
APOA1P02647 MTCO2P4-201ENST00000517968 247 ntBASIC0.09□□□□□ -2.4
APOA1P02647 AC245884.10-201ENST00000597355 337 ntBASIC0.09□□□□□ -2.4
APOA1P02647 AC104695.3-201ENST00000604052 296 ntBASIC0.09□□□□□ -2.4
APOA1P02647 AL162730.1-201ENST00000605734 292 ntBASIC0.09□□□□□ -2.4
APOA1P02647 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.09□□□□□ -2.4
APOA1P02647 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
APOA1P02647 Y_RNA.191-201ENST00000363972 113 ntBASIC0.08□□□□□ -2.4
APOA1P02647 RNU6-38P-201ENST00000384085 107 ntBASIC0.08□□□□□ -2.4
APOA1P02647 MIR136-201ENST00000385207 82 ntBASIC0.08□□□□□ -2.4
APOA1P02647 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.08□□□□□ -2.4
APOA1P02647 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.08□□□□□ -2.4
APOA1P02647 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.08□□□□□ -2.4
APOA1P02647 AC026371.1-201ENST00000551867 419 ntBASIC0.08□□□□□ -2.4
APOA1P02647 AC109347.2-201ENST00000610220 349 ntBASIC0.08□□□□□ -2.4
APOA1P02647 AL138726.1-201ENST00000614873 333 ntBASIC0.08□□□□□ -2.4
APOA1P02647 AC015726.2-201ENST00000620112 122 ntBASIC0.08□□□□□ -2.4
APOA1P02647 AC073534.2-201ENST00000620377 381 ntBASIC0.08□□□□□ -2.4
APOA1P02647 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
APOA1P02647 SNORD113-7-201ENST00000363762 77 ntBASIC0.07□□□□□ -2.4
APOA1P02647 MTCYBP4-201ENST00000401524 249 ntBASIC0.07□□□□□ -2.4
APOA1P02647 AC073464.1-201ENST00000429823 534 ntBASIC0.07□□□□□ -2.4
APOA1P02647 AL137792.2-201ENST00000443484 235 ntBASIC0.07□□□□□ -2.4
APOA1P02647 RNU7-187P-201ENST00000458985 68 ntBASIC0.07□□□□□ -2.4
APOA1P02647 RPL30P10-201ENST00000488148 337 ntBASIC0.07□□□□□ -2.4
APOA1P02647 MTCO2P30-201ENST00000503662 364 ntBASIC0.07□□□□□ -2.4
APOA1P02647 RNU7-43P-201ENST00000516554 64 ntBASIC0.07□□□□□ -2.4
APOA1P02647 SNORA18.7-201ENST00000516910 131 ntBASIC0.07□□□□□ -2.4
APOA1P02647 MIR4769-201ENST00000584126 77 ntBASIC0.07□□□□□ -2.4
APOA1P02647 AC092807.2-201ENST00000609367 243 ntBASIC0.07□□□□□ -2.4
APOA1P02647 MIR6788-201ENST00000618842 66 ntBASIC0.07□□□□□ -2.4
APOA1P02647 AC092634.7-201ENST00000621022 103 ntBASIC0.07□□□□□ -2.4
APOA1P02647 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.06□□□□□ -2.4
APOA1P02647 MIR18A-201ENST00000362310 71 ntBASIC0.06□□□□□ -2.4
APOA1P02647 MIR548J-201ENST00000408833 112 ntBASIC0.06□□□□□ -2.4
APOA1P02647 RNA5SP95-201ENST00000410319 137 ntBASIC0.06□□□□□ -2.4
APOA1P02647 AC005534.2-201ENST00000431047 433 ntBASIC0.06□□□□□ -2.4
APOA1P02647 AL606489.2-201ENST00000433886 234 ntBASIC0.06□□□□□ -2.4
APOA1P02647 AL031667.1-201ENST00000440222 725 ntBASIC0.06□□□□□ -2.4
APOA1P02647 MTCO3P10-201ENST00000455912 772 ntBASIC0.06□□□□□ -2.4
APOA1P02647 MIR3684-201ENST00000579779 74 ntBASIC0.06□□□□□ -2.4
APOA1P02647 MIR4431-201ENST00000579990 94 ntBASIC0.06□□□□□ -2.4
APOA1P02647 MIR151B-201ENST00000584249 96 ntBASIC0.06□□□□□ -2.4
APOA1P02647 AC040904.1-201ENST00000590850 223 ntBASIC0.06□□□□□ -2.4
APOA1P02647 FAM157A-202ENST00000615155 405 ntBASIC0.06□□□□□ -2.4
APOA1P02647 MIR6513-201ENST00000621188 64 ntBASIC0.06□□□□□ -2.4
APOA1P02647 AC127459.3-201ENST00000624328 466 ntBASIC0.06□□□□□ -2.4
APOA1P02647 RNA5SP62-201ENST00000363457 110 ntBASIC0.05□□□□□ -2.4
APOA1P02647 SNORD114-22-201ENST00000365423 72 ntBASIC0.05□□□□□ -2.4
APOA1P02647 RNU6-136P-201ENST00000384663 107 ntBASIC0.05□□□□□ -2.4
APOA1P02647 EIF4E2P1-201ENST00000393781 255 ntBASIC0.05□□□□□ -2.4
APOA1P02647 AL392103.1-201ENST00000447000 198 ntBASIC0.05□□□□□ -2.4
APOA1P02647 SNRPGP12-201ENST00000449481 213 ntBASIC0.05□□□□□ -2.4
APOA1P02647 RNU6-1208P-201ENST00000459588 107 ntBASIC0.05□□□□□ -2.4
APOA1P02647 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
APOA1P02647 AC022960.3-201ENST00000619794 441 ntBASIC0.05□□□□□ -2.4
APOA1P02647 Y_RNA.151-201ENST00000363566 112 ntBASIC0.04□□□□□ -2.4
APOA1P02647 RNU4-45P-201ENST00000365469 141 ntBASIC0.04□□□□□ -2.4
APOA1P02647 MIR15B-201ENST00000385045 98 ntBASIC0.04□□□□□ -2.4
APOA1P02647 AL353193.1-201ENST00000421444 268 ntBASIC0.04□□□□□ -2.4
APOA1P02647 MTCO2P19-201ENST00000427513 598 ntBASIC0.04□□□□□ -2.4
APOA1P02647 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.04□□□□□ -2.4
APOA1P02647 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
APOA1P02647 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.04□□□□□ -2.4
APOA1P02647 SNORA40.12-201ENST00000516329 111 ntBASIC0.04□□□□□ -2.4
APOA1P02647 Y_RNA.683-201ENST00000516508 93 ntBASIC0.04□□□□□ -2.4
APOA1P02647 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.04□□□□□ -2.4
APOA1P02647 MIR4452-201ENST00000583004 71 ntBASIC0.04□□□□□ -2.4
APOA1P02647 AC104260.1-201ENST00000616660 539 ntBASIC0.04□□□□□ -2.4
APOA1P02647 RMST_2.1-201ENST00000617263 136 ntBASIC0.04□□□□□ -2.4
APOA1P02647 RNU6-117P-201ENST00000365415 107 ntBASIC0.03□□□□□ -2.4
APOA1P02647 RNU4-20P-201ENST00000365601 151 ntBASIC0.03□□□□□ -2.4
APOA1P02647 RNU5A-2P-201ENST00000384337 116 ntBASIC0.03□□□□□ -2.4
APOA1P02647 RNU6-1105P-201ENST00000384774 107 ntBASIC0.03□□□□□ -2.4
APOA1P02647 MIR520H-201ENST00000385126 88 ntBASIC0.03□□□□□ -2.4
APOA1P02647 CALM2P3-201ENST00000400429 449 ntBASIC0.03□□□□□ -2.4
APOA1P02647 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms