Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 HMGB3P3-201ENST00000510526 400 ntBASIC1.99□□□□□ -2.09
COL2A1P02458 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.99□□□□□ -2.09
COL2A1P02458 MIR4308-201ENST00000580634 81 ntBASIC1.99□□□□□ -2.09
COL2A1P02458 RMST_6.1-201ENST00000611980 203 ntBASIC1.99□□□□□ -2.09
COL2A1P02458 FO624990.1-201ENST00000636373 85 ntBASIC1.99□□□□□ -2.09
COL2A1P02458 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.99□□□□□ -2.09
COL2A1P02458 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL2A1P02458 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 Y_RNA.101-201ENST00000363154 102 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 RNU6-778P-201ENST00000363269 103 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 RNU6-1285P-201ENST00000363480 105 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 RNU6-873P-201ENST00000363833 107 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 RNU6-326P-201ENST00000365480 107 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 RNU6-1145P-201ENST00000384246 107 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 RNU6-378P-201ENST00000384324 107 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.98□□□□□ -2.09
COL2A1P02458 RNU5A-5P-201ENST00000411054 116 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 POLR2KP2-201ENST00000438155 177 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.98□□□□□ -2.09
COL2A1P02458 MRPL42P6-201ENST00000486397 371 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 SNORA40.9-201ENST00000515895 93 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 RNU6-1114P-201ENST00000516022 107 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 RNU1-61P-201ENST00000516107 151 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 SNORA31.16-201ENST00000516773 139 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 RNA5SP102-201ENST00000516865 106 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 MIR3144-201ENST00000579460 79 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 AC024581.2-201ENST00000619986 252 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 snoU18.1-201ENST00000629629 71 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.98□□□□□ -2.09
COL2A1P02458 ZNF204P-201ENST00000416749 2397 ntBASIC1.98□□□□□ -2.09
COL2A1P02458 RNU5B-2P-201ENST00000363036 113 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 Y_RNA.233-201ENST00000364407 101 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 RNU4-56P-201ENST00000364700 142 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 Y_RNA.275-201ENST00000364726 110 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 Y_RNA.291-201ENST00000364886 113 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 RNU6-1130P-201ENST00000365434 107 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 RNU6-1135P-201ENST00000411083 103 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.97□□□□□ -2.09
COL2A1P02458 RPS23P5-201ENST00000495419 428 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 SNORA27.4-201ENST00000516650 95 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 SNORA31.23-201ENST00000517219 133 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 AP004607.1-201ENST00000524456 203 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.97□□□□□ -2.09
COL2A1P02458 MIR3618-201ENST00000580330 88 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 AC037487.3-201ENST00000606668 112 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 AC004467.1-201ENST00000615678 330 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 SCARNA4-202ENST00000625402 129 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 RBBP8P1-201ENST00000449447 1844 ntBASIC1.97□□□□□ -2.09
COL2A1P02458 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.97□□□□□ -2.09
COL2A1P02458 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.97□□□□□ -2.09
COL2A1P02458 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.09
COL2A1P02458 AL391516.1-201ENST00000554380 2449 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.96□□□□□ -2.1
COL2A1P02458 RNU4-80P-201ENST00000363200 141 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 SNORA72.2-201ENST00000365028 127 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 RNU6-514P-201ENST00000384208 107 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 RNU6-159P-201ENST00000391080 106 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 HMGN2P30-201ENST00000423237 256 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 BX510359.4-201ENST00000423750 193 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 AL590383.1-201ENST00000428602 75 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.96□□□□□ -2.1
COL2A1P02458 AC007969.2-201ENST00000441891 191 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.96□□□□□ -2.1
COL2A1P02458 AC012308.1-201ENST00000451232 178 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.96□□□□□ -2.1
COL2A1P02458 AC074133.1-201ENST00000515696 183 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 RN7SKP49-201ENST00000516675 260 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.96□□□□□ -2.1
COL2A1P02458 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.96□□□□□ -2.1
COL2A1P02458 AC005176.2-201ENST00000596933 147 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.96□□□□□ -2.1
COL2A1P02458 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 AC022709.1-201ENST00000615967 87 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 AC068831.7-201ENST00000616954 363 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 U2.21-201ENST00000637295 81 ntBASIC1.96□□□□□ -2.1
COL2A1P02458 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.96□□□□□ -2.1
COL2A1P02458 MIR410-201ENST00000362222 80 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 RNU6-270P-201ENST00000364131 105 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 RNU6-142P-201ENST00000384019 107 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 Y_RNA.498-201ENST00000384460 102 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 Y_RNA.570-201ENST00000384750 101 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 RNU1-139P-201ENST00000391307 165 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 Y_RNA.597-201ENST00000410463 100 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 ELOCP21-201ENST00000412558 336 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 RPL39P29-201ENST00000447779 157 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 AC007395.1-201ENST00000451333 677 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.95□□□□□ -2.1
COL2A1P02458 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.95□□□□□ -2.1
COL2A1P02458 RNU7-200P-201ENST00000516105 62 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.95□□□□□ -2.1
COL2A1P02458 Z83818.1-201ENST00000603584 150 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 PVT1_3.1-201ENST00000620853 95 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 AC027309.3-201ENST00000623419 351 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 AC091932.3-201ENST00000624223 323 ntBASIC1.95□□□□□ -2.1
COL2A1P02458 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL2A1P02458 RNU4-10P-201ENST00000364383 140 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms