Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.33□□□□□ -2.04
ZBED1O96006 AC005828.6-201ENST00000606610 232 ntBASIC2.33□□□□□ -2.04
ZBED1O96006 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
ZBED1O96006 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.33□□□□□ -2.04
ZBED1O96006 AC009831.4-201ENST00000620744 325 ntBASIC2.33□□□□□ -2.04
ZBED1O96006 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.33□□□□□ -2.04
ZBED1O96006 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ZBED1O96006 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
ZBED1O96006 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ZBED1O96006 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ZBED1O96006 SNORD115-46-201ENST00000390982 71 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 RNU11-5P-201ENST00000391216 129 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 RNA5SP467-201ENST00000391274 118 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 AL512604.1-201ENST00000404812 257 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 AC024067.1-201ENST00000426199 223 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 AL731563.1-201ENST00000442202 214 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 RNU6-1045P-201ENST00000516321 107 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 RNU6-635P-201ENST00000516651 102 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 AC024995.1-201ENST00000523014 93 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.32□□□□□ -2.04
ZBED1O96006 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.32□□□□□ -2.04
ZBED1O96006 MIR1273D-201ENST00000577266 86 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.32□□□□□ -2.04
ZBED1O96006 AC116312.1-201ENST00000606841 314 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 U6.73-201ENST00000619194 103 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 MIR6873-201ENST00000622788 63 ntBASIC2.32□□□□□ -2.04
ZBED1O96006 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.31□□□□□ -2.04
ZBED1O96006 SNORD114-7-201ENST00000362520 77 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 RNU6-1019P-201ENST00000364424 107 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 SNORA8-201ENST00000384574 139 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 RPL21P1-201ENST00000399532 476 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 SNORA11.2-201ENST00000408318 127 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 RN7SKP223-201ENST00000410582 62 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 AL158823.1-201ENST00000418441 478 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 POLR2KP2-201ENST00000438155 177 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 AC069257.2-201ENST00000441819 155 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 LINC01399-202ENST00000458450 244 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 MTATP8P1-201ENST00000467115 207 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 AC010409.1-201ENST00000487382 476 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.31□□□□□ -2.04
ZBED1O96006 RPS29P21-201ENST00000496272 170 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 RNA5SP200-201ENST00000516360 103 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.31□□□□□ -2.04
ZBED1O96006 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.31□□□□□ -2.04
ZBED1O96006 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.31□□□□□ -2.04
ZBED1O96006 AC136443.5-201ENST00000603741 370 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 MIR6132-201ENST00000622083 109 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 AC010615.1-201ENST00000594254 1764 ntBASIC2.31□□□□□ -2.04
ZBED1O96006 RNU4-90P-201ENST00000362773 141 ntBASIC2.3□□□□□ -2.04
ZBED1O96006 RNU6-1199P-201ENST00000411249 104 ntBASIC2.3□□□□□ -2.04
ZBED1O96006 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ZBED1O96006 RPL23AP7-203ENST00000449021 469 ntBASIC2.3□□□□□ -2.04
ZBED1O96006 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.3□□□□□ -2.04
ZBED1O96006 RPL23AP3-201ENST00000453844 468 ntBASIC2.3□□□□□ -2.04
ZBED1O96006 HMGB3P17-201ENST00000504195 649 ntBASIC2.3□□□□□ -2.04
ZBED1O96006 RNU7-172P-201ENST00000517125 64 ntBASIC2.3□□□□□ -2.04
ZBED1O96006 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.3□□□□□ -2.04
ZBED1O96006 RPL21P9-201ENST00000556149 474 ntBASIC2.3□□□□□ -2.04
ZBED1O96006 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.3□□□□□ -2.04
ZBED1O96006 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
ZBED1O96006 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
ZBED1O96006 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
ZBED1O96006 Y_RNA.329-201ENST00000365209 107 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 RNU6-505P-201ENST00000384427 107 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 RNU6-710P-201ENST00000410424 105 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 RNU2-7P-201ENST00000410794 178 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 RN7SKP192-201ENST00000411291 327 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 HMGN2P38-201ENST00000423806 265 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 IPO7P1-201ENST00000442031 636 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 DYNLT3P2-201ENST00000442517 295 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 RPS26P55-201ENST00000471178 356 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 RN7SL429P-201ENST00000479090 223 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 RN7SL489P-201ENST00000486185 223 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 RN7SL327P-201ENST00000488659 223 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 AC025465.3-201ENST00000510570 311 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 RNU6-1278P-201ENST00000516130 107 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 SCARNA16.3-201ENST00000516595 184 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 AP003733.2-201ENST00000529409 171 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.29□□□□□ -2.04
ZBED1O96006 AC008269.2-201ENST00000561915 1105 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 PRR13P7-201ENST00000605538 430 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 RN7SL853P-201ENST00000617250 223 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 AP000553.5-201ENST00000641933 54 ntBASIC2.29□□□□□ -2.04
ZBED1O96006 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ZBED1O96006 Y_RNA.64-201ENST00000362845 102 ntBASIC2.28□□□□□ -2.04
ZBED1O96006 U8.2-201ENST00000363156 134 ntBASIC2.28□□□□□ -2.04
ZBED1O96006 RNU6-238P-201ENST00000363313 106 ntBASIC2.28□□□□□ -2.04
ZBED1O96006 Y_RNA.124-201ENST00000363339 93 ntBASIC2.28□□□□□ -2.04
ZBED1O96006 SNORA33-201ENST00000363664 130 ntBASIC2.28□□□□□ -2.04
ZBED1O96006 Y_RNA.176-201ENST00000363815 109 ntBASIC2.28□□□□□ -2.04
ZBED1O96006 SNORA70B-201ENST00000384210 135 ntBASIC2.28□□□□□ -2.04
ZBED1O96006 MIR17-201ENST00000385012 84 ntBASIC2.28□□□□□ -2.04
ZBED1O96006 SNORA48.3-201ENST00000391081 134 ntBASIC2.28□□□□□ -2.04
ZBED1O96006 RNU6-1109P-201ENST00000391187 107 ntBASIC2.28□□□□□ -2.04
ZBED1O96006 RNA5SP212-201ENST00000391223 107 ntBASIC2.28□□□□□ -2.04
ZBED1O96006 EBAG9P1-201ENST00000418955 543 ntBASIC2.28□□□□□ -2.04
ZBED1O96006 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.28□□□□□ -2.04
ZBED1O96006 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms