Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC068647.2-201ENST00000637380 353 ntBASIC1.06□□□□□ -2.24
MBD3O95983 ELOCP21-201ENST00000412558 336 ntBASIC1.05□□□□□ -2.24
MBD3O95983 MTCYBP10-201ENST00000424905 650 ntBASIC1.05□□□□□ -2.24
MBD3O95983 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.05□□□□□ -2.24
MBD3O95983 AC092991.1-201ENST00000477176 376 ntBASIC1.05□□□□□ -2.24
MBD3O95983 TRMT112P2-201ENST00000512910 132 ntBASIC1.05□□□□□ -2.24
MBD3O95983 RNU7-172P-201ENST00000517125 64 ntBASIC1.05□□□□□ -2.24
MBD3O95983 CBX3P8-201ENST00000532412 525 ntBASIC1.05□□□□□ -2.24
MBD3O95983 AC090049.2-201ENST00000550377 109 ntBASIC1.05□□□□□ -2.24
MBD3O95983 MIR4790-201ENST00000577799 79 ntBASIC1.05□□□□□ -2.24
MBD3O95983 AC018638.8-201ENST00000588755 281 ntBASIC1.05□□□□□ -2.24
MBD3O95983 AL022345.2-201ENST00000606307 135 ntBASIC1.05□□□□□ -2.24
MBD3O95983 BX284668.6-201ENST00000606899 438 ntBASIC1.05□□□□□ -2.24
MBD3O95983 AC093913.1-201ENST00000614178 329 ntBASIC1.05□□□□□ -2.24
MBD3O95983 AL391516.1-201ENST00000554380 2449 ntBASIC1.05□□□□□ -2.24
MBD3O95983 MTND5P16-201ENST00000460269 1703 ntBASIC1.04□□□□□ -2.24
MBD3O95983 Y_RNA.4-201ENST00000362333 112 ntBASIC1.04□□□□□ -2.24
MBD3O95983 RNU6-199P-201ENST00000362954 107 ntBASIC1.04□□□□□ -2.24
MBD3O95983 RNU6-1059P-201ENST00000363752 98 ntBASIC1.04□□□□□ -2.24
MBD3O95983 SNORA20B-201ENST00000384220 132 ntBASIC1.04□□□□□ -2.24
MBD3O95983 RNU6-700P-201ENST00000391043 107 ntBASIC1.04□□□□□ -2.24
MBD3O95983 AL355796.1-201ENST00000406706 323 ntBASIC1.04□□□□□ -2.24
MBD3O95983 MTND1P34-201ENST00000438556 671 ntBASIC1.04□□□□□ -2.24
MBD3O95983 DYNLT3P2-201ENST00000442517 295 ntBASIC1.04□□□□□ -2.24
MBD3O95983 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.04□□□□□ -2.24
MBD3O95983 AC026782.1-201ENST00000512952 449 ntBASIC1.04□□□□□ -2.24
MBD3O95983 RNU4-49P-201ENST00000516080 140 ntBASIC1.04□□□□□ -2.24
MBD3O95983 RNU6-107P-201ENST00000516643 102 ntBASIC1.04□□□□□ -2.24
MBD3O95983 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.04□□□□□ -2.24
MBD3O95983 AL358944.1-201ENST00000528537 144 ntBASIC1.04□□□□□ -2.24
MBD3O95983 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.04□□□□□ -2.24
MBD3O95983 AC023157.2-201ENST00000540596 141 ntBASIC1.04□□□□□ -2.24
MBD3O95983 AC091178.2-201ENST00000584401 117 ntBASIC1.04□□□□□ -2.24
MBD3O95983 AC125232.2-201ENST00000592457 143 ntBASIC1.04□□□□□ -2.24
MBD3O95983 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.04□□□□□ -2.24
MBD3O95983 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.04□□□□□ -2.24
MBD3O95983 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
MBD3O95983 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
MBD3O95983 Y_RNA.164-201ENST00000363709 102 ntBASIC1.03□□□□□ -2.24
MBD3O95983 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
MBD3O95983 RNU6-424P-201ENST00000384367 105 ntBASIC1.03□□□□□ -2.24
MBD3O95983 Y_RNA.516-201ENST00000384541 124 ntBASIC1.03□□□□□ -2.24
MBD3O95983 MIR19B1-201ENST00000384829 87 ntBASIC1.03□□□□□ -2.24
MBD3O95983 SNORD12-201ENST00000391002 90 ntBASIC1.03□□□□□ -2.24
MBD3O95983 AC074085.1-201ENST00000413598 418 ntBASIC1.03□□□□□ -2.24
MBD3O95983 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
MBD3O95983 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.03□□□□□ -2.24
MBD3O95983 SNORA31.4-201ENST00000516049 129 ntBASIC1.03□□□□□ -2.24
MBD3O95983 RNU6-1016P-201ENST00000516689 94 ntBASIC1.03□□□□□ -2.24
MBD3O95983 RNU6-273P-201ENST00000516937 96 ntBASIC1.03□□□□□ -2.24
MBD3O95983 SNORA70.22-201ENST00000517160 124 ntBASIC1.03□□□□□ -2.24
MBD3O95983 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.03□□□□□ -2.24
MBD3O95983 AC005828.6-201ENST00000606610 232 ntBASIC1.03□□□□□ -2.24
MBD3O95983 AC005014.2-201ENST00000607795 599 ntBASIC1.03□□□□□ -2.24
MBD3O95983 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
MBD3O95983 SNORA27.1-201ENST00000362604 124 ntBASIC1.02□□□□□ -2.25
MBD3O95983 SNORA2.2-201ENST00000365473 135 ntBASIC1.02□□□□□ -2.25
MBD3O95983 RNA5SP482-201ENST00000391269 118 ntBASIC1.02□□□□□ -2.25
MBD3O95983 MIR548K-201ENST00000408406 116 ntBASIC1.02□□□□□ -2.25
MBD3O95983 RNU6-321P-201ENST00000410912 106 ntBASIC1.02□□□□□ -2.25
MBD3O95983 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.02□□□□□ -2.25
MBD3O95983 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.02□□□□□ -2.25
MBD3O95983 STAG3L5P-204ENST00000443759 179 ntBASIC1.02□□□□□ -2.25
MBD3O95983 UQCRBP2-201ENST00000447827 297 ntBASIC1.02□□□□□ -2.25
MBD3O95983 PCNPP5-201ENST00000452246 481 ntBASIC1.02□□□□□ -2.25
MBD3O95983 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.02□□□□□ -2.25
MBD3O95983 RNA5SP20-201ENST00000515976 84 ntBASIC1.02□□□□□ -2.25
MBD3O95983 RNA5SP168-201ENST00000516642 112 ntBASIC1.02□□□□□ -2.25
MBD3O95983 RN7SKP49-201ENST00000516675 260 ntBASIC1.02□□□□□ -2.25
MBD3O95983 AP002004.2-201ENST00000531656 154 ntBASIC1.02□□□□□ -2.25
MBD3O95983 AC104260.1-201ENST00000616660 539 ntBASIC1.02□□□□□ -2.25
MBD3O95983 AC012676.2-201ENST00000619258 186 ntBASIC1.02□□□□□ -2.25
MBD3O95983 AC073544.1-201ENST00000600110 1595 ntBASIC1.01□□□□□ -2.25
MBD3O95983 RNU6-222P-201ENST00000362438 107 ntBASIC1.01□□□□□ -2.25
MBD3O95983 SNORD114-2-201ENST00000363953 78 ntBASIC1.01□□□□□ -2.25
MBD3O95983 Y_RNA.265-201ENST00000364677 108 ntBASIC1.01□□□□□ -2.25
MBD3O95983 Y_RNA.327-201ENST00000365201 102 ntBASIC1.01□□□□□ -2.25
MBD3O95983 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
MBD3O95983 MIR222-201ENST00000384992 110 ntBASIC1.01□□□□□ -2.25
MBD3O95983 MIR1277-201ENST00000408536 78 ntBASIC1.01□□□□□ -2.25
MBD3O95983 RNA5SP247-201ENST00000411181 105 ntBASIC1.01□□□□□ -2.25
MBD3O95983 RNU6-1001P-201ENST00000411265 100 ntBASIC1.01□□□□□ -2.25
MBD3O95983 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.01□□□□□ -2.25
MBD3O95983 OR9P1P-201ENST00000496431 281 ntBASIC1.01□□□□□ -2.25
MBD3O95983 RNU6-322P-201ENST00000516010 103 ntBASIC1.01□□□□□ -2.25
MBD3O95983 Y_RNA.682-201ENST00000516457 100 ntBASIC1.01□□□□□ -2.25
MBD3O95983 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.01□□□□□ -2.25
MBD3O95983 AC005899.2-201ENST00000584353 90 ntBASIC1.01□□□□□ -2.25
MBD3O95983 MIR4781-201ENST00000585250 76 ntBASIC1.01□□□□□ -2.25
MBD3O95983 AL357312.1-201ENST00000603879 298 ntBASIC1.01□□□□□ -2.25
MBD3O95983 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.01□□□□□ -2.25
MBD3O95983 AC002553.4-201ENST00000616896 331 ntBASIC1.01□□□□□ -2.25
MBD3O95983 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MBD3O95983 SNORA25.9-201ENST00000365087 128 ntBASIC1□□□□□ -2.25
MBD3O95983 Y_RNA.318-201ENST00000365131 97 ntBASIC1□□□□□ -2.25
MBD3O95983 RNU5A-5P-201ENST00000411054 116 ntBASIC1□□□□□ -2.25
MBD3O95983 AL137792.2-201ENST00000443484 235 ntBASIC1□□□□□ -2.25
MBD3O95983 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1□□□□□ -2.25
MBD3O95983 AC105758.1-201ENST00000506038 399 ntBASIC1□□□□□ -2.25
MBD3O95983 RNU6-1278P-201ENST00000516130 107 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms