Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 MIR424-201ENST00000362227 98 ntBASIC1.89□□□□□ -2.11
DDX58O95786 RNU6-1301P-201ENST00000362724 104 ntBASIC1.89□□□□□ -2.11
DDX58O95786 SNORA33-201ENST00000363664 130 ntBASIC1.89□□□□□ -2.11
DDX58O95786 Y_RNA.428-201ENST00000384078 102 ntBASIC1.89□□□□□ -2.11
DDX58O95786 MIR559-201ENST00000385188 96 ntBASIC1.89□□□□□ -2.11
DDX58O95786 MIR1304-201ENST00000408243 91 ntBASIC1.89□□□□□ -2.11
DDX58O95786 RNU6-1186P-201ENST00000410429 97 ntBASIC1.89□□□□□ -2.11
DDX58O95786 AC096644.2-201ENST00000429278 159 ntBASIC1.89□□□□□ -2.11
DDX58O95786 RNU7-95P-201ENST00000459222 64 ntBASIC1.89□□□□□ -2.11
DDX58O95786 SNORA40.9-201ENST00000515895 93 ntBASIC1.89□□□□□ -2.11
DDX58O95786 RNA5SP437-201ENST00000517249 129 ntBASIC1.89□□□□□ -2.11
DDX58O95786 AC024995.1-201ENST00000523014 93 ntBASIC1.89□□□□□ -2.11
DDX58O95786 AL137100.2-201ENST00000555786 315 ntBASIC1.89□□□□□ -2.11
DDX58O95786 AL359075.3-201ENST00000613288 217 ntBASIC1.89□□□□□ -2.11
DDX58O95786 AC100821.1-201ENST00000523153 2479 ntBASIC1.89□□□□□ -2.11
DDX58O95786 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.89□□□□□ -2.11
DDX58O95786 RNU4-13P-201ENST00000364019 141 ntBASIC1.88□□□□□ -2.11
DDX58O95786 RNU6-1264P-201ENST00000383891 107 ntBASIC1.88□□□□□ -2.11
DDX58O95786 MIR934-201ENST00000401241 83 ntBASIC1.88□□□□□ -2.11
DDX58O95786 RNU6-321P-201ENST00000410912 106 ntBASIC1.88□□□□□ -2.11
DDX58O95786 ELOCP21-201ENST00000412558 336 ntBASIC1.88□□□□□ -2.11
DDX58O95786 AL354695.1-201ENST00000427935 228 ntBASIC1.88□□□□□ -2.11
DDX58O95786 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.88□□□□□ -2.11
DDX58O95786 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.88□□□□□ -2.11
DDX58O95786 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.88□□□□□ -2.11
DDX58O95786 SNORD116.3-201ENST00000517176 78 ntBASIC1.88□□□□□ -2.11
DDX58O95786 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.88□□□□□ -2.11
DDX58O95786 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.88□□□□□ -2.11
DDX58O95786 SNORA63D-201ENST00000364359 132 ntBASIC1.87□□□□□ -2.11
DDX58O95786 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.87□□□□□ -2.11
DDX58O95786 HSPE1P24-201ENST00000450782 238 ntBASIC1.87□□□□□ -2.11
DDX58O95786 snoU13.27-201ENST00000459278 104 ntBASIC1.87□□□□□ -2.11
DDX58O95786 AC023790.1-201ENST00000482174 347 ntBASIC1.87□□□□□ -2.11
DDX58O95786 Y_RNA.673-201ENST00000516306 88 ntBASIC1.87□□□□□ -2.11
DDX58O95786 AL161670.1-201ENST00000554348 137 ntBASIC1.87□□□□□ -2.11
DDX58O95786 ZNF209P-201ENST00000593450 2304 ntBASIC1.87□□□□□ -2.11
DDX58O95786 AC016925.2-201ENST00000605108 242 ntBASIC1.87□□□□□ -2.11
DDX58O95786 U2.1-201ENST00000618978 145 ntBASIC1.87□□□□□ -2.11
DDX58O95786 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
DDX58O95786 MIR126-201ENST00000362291 85 ntBASIC1.86□□□□□ -2.11
DDX58O95786 AC022028.1-201ENST00000412054 408 ntBASIC1.86□□□□□ -2.11
DDX58O95786 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.86□□□□□ -2.11
DDX58O95786 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.86□□□□□ -2.11
DDX58O95786 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.86□□□□□ -2.11
DDX58O95786 JTBP1-201ENST00000441314 247 ntBASIC1.86□□□□□ -2.11
DDX58O95786 SNORD65B-201ENST00000459126 73 ntBASIC1.86□□□□□ -2.11
DDX58O95786 RPS27P22-201ENST00000478056 241 ntBASIC1.86□□□□□ -2.11
DDX58O95786 AC027575.1-201ENST00000481064 460 ntBASIC1.86□□□□□ -2.11
DDX58O95786 RNU6-408P-201ENST00000515910 100 ntBASIC1.86□□□□□ -2.11
DDX58O95786 MIR4709-201ENST00000577272 72 ntBASIC1.86□□□□□ -2.11
DDX58O95786 MIR4781-201ENST00000585250 76 ntBASIC1.86□□□□□ -2.11
DDX58O95786 AC022432.1-201ENST00000595739 310 ntBASIC1.86□□□□□ -2.11
DDX58O95786 MIR8063-201ENST00000621930 81 ntBASIC1.86□□□□□ -2.11
DDX58O95786 MIR3674-201ENST00000636576 68 ntBASIC1.86□□□□□ -2.11
DDX58O95786 Y_RNA.463-201ENST00000384271 102 ntBASIC1.85□□□□□ -2.11
DDX58O95786 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.85□□□□□ -2.11
DDX58O95786 AC009474.2-201ENST00000451383 136 ntBASIC1.85□□□□□ -2.11
DDX58O95786 RNU7-34P-201ENST00000459394 64 ntBASIC1.85□□□□□ -2.11
DDX58O95786 AC005908.1-201ENST00000468701 347 ntBASIC1.85□□□□□ -2.11
DDX58O95786 RPL26P26-201ENST00000480251 434 ntBASIC1.85□□□□□ -2.11
DDX58O95786 AC010469.2-201ENST00000496412 480 ntBASIC1.85□□□□□ -2.11
DDX58O95786 AL163195.1-201ENST00000496941 348 ntBASIC1.85□□□□□ -2.11
DDX58O95786 RNU1-92P-201ENST00000517017 135 ntBASIC1.85□□□□□ -2.11
DDX58O95786 AC023157.2-201ENST00000540596 141 ntBASIC1.85□□□□□ -2.11
DDX58O95786 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
DDX58O95786 MIR4285-201ENST00000581001 85 ntBASIC1.85□□□□□ -2.11
DDX58O95786 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.85□□□□□ -2.11
DDX58O95786 AL359821.1-201ENST00000605519 182 ntBASIC1.85□□□□□ -2.11
DDX58O95786 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.85□□□□□ -2.11
DDX58O95786 RNU4-42P-201ENST00000364738 142 ntBASIC1.84□□□□□ -2.11
DDX58O95786 RNU6-950P-201ENST00000384651 107 ntBASIC1.84□□□□□ -2.11
DDX58O95786 RAB28P5-201ENST00000427490 651 ntBASIC1.84□□□□□ -2.11
DDX58O95786 AC005002.2-201ENST00000438228 269 ntBASIC1.84□□□□□ -2.11
DDX58O95786 AL163540.1-201ENST00000485382 386 ntBASIC1.84□□□□□ -2.11
DDX58O95786 AC010598.1-201ENST00000510378 103 ntBASIC1.84□□□□□ -2.11
DDX58O95786 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.84□□□□□ -2.11
DDX58O95786 RAB11AP2-201ENST00000545905 639 ntBASIC1.84□□□□□ -2.11
DDX58O95786 AL442163.3-201ENST00000554110 156 ntBASIC1.84□□□□□ -2.11
DDX58O95786 AC006600.1-201ENST00000572529 153 ntBASIC1.84□□□□□ -2.11
DDX58O95786 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.84□□□□□ -2.11
DDX58O95786 MIR4438-201ENST00000585271 93 ntBASIC1.84□□□□□ -2.11
DDX58O95786 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
DDX58O95786 ICE2P2-201ENST00000483823 2787 ntBASIC1.83□□□□□ -2.12
DDX58O95786 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
DDX58O95786 RNU4-79P-201ENST00000362764 141 ntBASIC1.83□□□□□ -2.12
DDX58O95786 RNU6-867P-201ENST00000364956 107 ntBASIC1.83□□□□□ -2.12
DDX58O95786 RNA5SP363-201ENST00000365072 115 ntBASIC1.83□□□□□ -2.12
DDX58O95786 RNU6-1310P-201ENST00000384153 107 ntBASIC1.83□□□□□ -2.12
DDX58O95786 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
DDX58O95786 Y_RNA.579-201ENST00000390939 94 ntBASIC1.83□□□□□ -2.12
DDX58O95786 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.83□□□□□ -2.12
DDX58O95786 RNU7-152P-201ENST00000458982 64 ntBASIC1.83□□□□□ -2.12
DDX58O95786 RPS26P45-201ENST00000471748 340 ntBASIC1.83□□□□□ -2.12
DDX58O95786 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.83□□□□□ -2.12
DDX58O95786 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
DDX58O95786 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
DDX58O95786 U8.1-201ENST00000362843 134 ntBASIC1.82□□□□□ -2.12
DDX58O95786 RNU5E-4P-201ENST00000364931 120 ntBASIC1.82□□□□□ -2.12
DDX58O95786 RNU6-407P-201ENST00000365280 104 ntBASIC1.82□□□□□ -2.12
DDX58O95786 RNA5SP109-201ENST00000391010 116 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms