Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RNU6-965P-201ENST00000516721 96 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.07□□□□□ -1.92
RAPGEF3O95398 AP002001.1-203ENST00000534002 267 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 NDUFA5P6-201ENST00000542110 379 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.07□□□□□ -1.92
RAPGEF3O95398 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.07□□□□□ -1.92
RAPGEF3O95398 MIR3683-201ENST00000580847 82 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 AC037487.3-201ENST00000606668 112 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 SDR42E1P4-201ENST00000620894 481 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RAPGEF3O95398 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RAPGEF3O95398 Y_RNA.101-201ENST00000363154 102 ntBASIC3.06□□□□□ -1.92
RAPGEF3O95398 Y_RNA.237-201ENST00000364439 102 ntBASIC3.06□□□□□ -1.92
RAPGEF3O95398 RNU6-438P-201ENST00000365561 103 ntBASIC3.06□□□□□ -1.92
RAPGEF3O95398 Y_RNA.446-201ENST00000384178 104 ntBASIC3.06□□□□□ -1.92
RAPGEF3O95398 Y_RNA.447-201ENST00000384184 113 ntBASIC3.06□□□□□ -1.92
RAPGEF3O95398 MIR548B-201ENST00000385247 97 ntBASIC3.06□□□□□ -1.92
RAPGEF3O95398 RNU2-38P-201ENST00000410856 79 ntBASIC3.06□□□□□ -1.92
RAPGEF3O95398 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.06□□□□□ -1.92
RAPGEF3O95398 HMGN2P18-201ENST00000450680 270 ntBASIC3.06□□□□□ -1.92
RAPGEF3O95398 HMGB3P17-201ENST00000504195 649 ntBASIC3.06□□□□□ -1.92
RAPGEF3O95398 RNA5SP490-201ENST00000517141 136 ntBASIC3.06□□□□□ -1.92
RAPGEF3O95398 DEFB108E-201ENST00000524692 240 ntBASIC3.06□□□□□ -1.92
RAPGEF3O95398 SNRPGP19-201ENST00000603826 189 ntBASIC3.06□□□□□ -1.92
RAPGEF3O95398 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.06□□□□□ -1.92
RAPGEF3O95398 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RAPGEF3O95398 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
RAPGEF3O95398 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RAPGEF3O95398 Y_RNA.286-201ENST00000364813 102 ntBASIC3.05□□□□□ -1.92
RAPGEF3O95398 Y_RNA.569-201ENST00000384749 103 ntBASIC3.05□□□□□ -1.92
RAPGEF3O95398 MIR1185-2-201ENST00000408687 86 ntBASIC3.05□□□□□ -1.92
RAPGEF3O95398 RNU2-48P-201ENST00000410694 191 ntBASIC3.05□□□□□ -1.92
RAPGEF3O95398 HMGN2P35-201ENST00000412164 270 ntBASIC3.05□□□□□ -1.92
RAPGEF3O95398 RNU7-26P-201ENST00000458980 63 ntBASIC3.05□□□□□ -1.92
RAPGEF3O95398 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.05□□□□□ -1.92
RAPGEF3O95398 SERF1AP1-201ENST00000514575 187 ntBASIC3.05□□□□□ -1.92
RAPGEF3O95398 RNU2-34P-201ENST00000516534 121 ntBASIC3.05□□□□□ -1.92
RAPGEF3O95398 RNU2-31P-201ENST00000516954 155 ntBASIC3.05□□□□□ -1.92
RAPGEF3O95398 AC012433.1-201ENST00000588916 398 ntBASIC3.05□□□□□ -1.92
RAPGEF3O95398 AC008749.1-201ENST00000597650 306 ntBASIC3.05□□□□□ -1.92
RAPGEF3O95398 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.05□□□□□ -1.92
RAPGEF3O95398 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
RAPGEF3O95398 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RAPGEF3O95398 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
RAPGEF3O95398 VTRNA1-1-201ENST00000363120 99 ntBASIC3.04□□□□□ -1.92
RAPGEF3O95398 RNU6-975P-201ENST00000384296 105 ntBASIC3.04□□□□□ -1.92
RAPGEF3O95398 Y_RNA.540-201ENST00000384638 111 ntBASIC3.04□□□□□ -1.92
RAPGEF3O95398 SUMO1P4-201ENST00000429430 302 ntBASIC3.04□□□□□ -1.92
RAPGEF3O95398 POLR2KP2-201ENST00000438155 177 ntBASIC3.04□□□□□ -1.92
RAPGEF3O95398 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.04□□□□□ -1.92
RAPGEF3O95398 SUMO1P2-201ENST00000452524 304 ntBASIC3.04□□□□□ -1.92
RAPGEF3O95398 AL137159.1-201ENST00000452808 512 ntBASIC3.04□□□□□ -1.92
RAPGEF3O95398 RNU7-57P-201ENST00000459540 60 ntBASIC3.04□□□□□ -1.92
RAPGEF3O95398 RNU2-12P-201ENST00000517216 168 ntBASIC3.04□□□□□ -1.92
RAPGEF3O95398 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.04□□□□□ -1.92
RAPGEF3O95398 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RAPGEF3O95398 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RAPGEF3O95398 AC080100.1-201ENST00000624239 5356 ntBASIC3.04□□□□□ -1.92
RAPGEF3O95398 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
RAPGEF3O95398 Y_RNA.136-201ENST00000363444 102 ntBASIC3.03□□□□□ -1.92
RAPGEF3O95398 Y_RNA.352-201ENST00000365439 102 ntBASIC3.03□□□□□ -1.92
RAPGEF3O95398 RNU6-1199P-201ENST00000411249 104 ntBASIC3.03□□□□□ -1.92
RAPGEF3O95398 AL445685.2-201ENST00000422551 342 ntBASIC3.03□□□□□ -1.92
RAPGEF3O95398 RNU6-1023P-201ENST00000516137 106 ntBASIC3.03□□□□□ -1.92
RAPGEF3O95398 RNU6-155P-201ENST00000516347 100 ntBASIC3.03□□□□□ -1.92
RAPGEF3O95398 RNU6-948P-201ENST00000516374 107 ntBASIC3.03□□□□□ -1.92
RAPGEF3O95398 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RAPGEF3O95398 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RAPGEF3O95398 Y_RNA.16-201ENST00000362421 102 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 RNU6-454P-201ENST00000364292 107 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 SNORA25B-201ENST00000365507 128 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 Y_RNA.383-201ENST00000383855 97 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 Y_RNA.416-201ENST00000384014 113 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RAPGEF3O95398 RNU6-847P-201ENST00000411115 108 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 CR769767.1-201ENST00000436337 346 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 AC009238.1-201ENST00000442165 424 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 AC009237.6-201ENST00000446969 424 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 AC018868.1-201ENST00000491307 315 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.02□□□□□ -1.93
RAPGEF3O95398 AC093259.1-201ENST00000509755 300 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 MIR4303-201ENST00000581299 66 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 snoZ196.1-201ENST00000625269 89 ntBASIC3.02□□□□□ -1.93
RAPGEF3O95398 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RAPGEF3O95398 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.02□□□□□ -1.93
RAPGEF3O95398 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.02□□□□□ -1.93
RAPGEF3O95398 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RAPGEF3O95398 Y_RNA.243-201ENST00000364481 109 ntBASIC3.01□□□□□ -1.93
RAPGEF3O95398 Y_RNA.332-201ENST00000365271 113 ntBASIC3.01□□□□□ -1.93
RAPGEF3O95398 AL627390.1-201ENST00000396055 340 ntBASIC3.01□□□□□ -1.93
RAPGEF3O95398 AC123900.1-201ENST00000420390 96 ntBASIC3.01□□□□□ -1.93
RAPGEF3O95398 RNU6-667P-201ENST00000517186 102 ntBASIC3.01□□□□□ -1.93
RAPGEF3O95398 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.01□□□□□ -1.93
RAPGEF3O95398 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3□□□□□ -1.93
RAPGEF3O95398 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3□□□□□ -1.93
RAPGEF3O95398 RNU6-1235P-201ENST00000384559 107 ntBASIC3□□□□□ -1.93
RAPGEF3O95398 SRIP3-201ENST00000413200 219 ntBASIC3□□□□□ -1.93
RAPGEF3O95398 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3□□□□□ -1.93
RAPGEF3O95398 RNU6-498P-201ENST00000459468 107 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms