Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AL158063.1-201ENST00000615349 536 ntBASIC0.35□□□□□ -2.35
VAPBO95292 MIR6515-201ENST00000619843 57 ntBASIC0.35□□□□□ -2.35
VAPBO95292 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
VAPBO95292 MIR6516-201ENST00000630554 81 ntBASIC0.35□□□□□ -2.35
VAPBO95292 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
VAPBO95292 RNU6-833P-201ENST00000363486 107 ntBASIC0.34□□□□□ -2.36
VAPBO95292 SNORD113-7-201ENST00000363762 77 ntBASIC0.34□□□□□ -2.36
VAPBO95292 RNU6-348P-201ENST00000384386 107 ntBASIC0.34□□□□□ -2.36
VAPBO95292 RNU6-159P-201ENST00000391080 106 ntBASIC0.34□□□□□ -2.36
VAPBO95292 RNA5SP222-201ENST00000411039 105 ntBASIC0.34□□□□□ -2.36
VAPBO95292 RPL30P16-201ENST00000419341 429 ntBASIC0.34□□□□□ -2.36
VAPBO95292 AC244098.3-201ENST00000424803 96 ntBASIC0.34□□□□□ -2.36
VAPBO95292 MTCO1P20-201ENST00000425366 358 ntBASIC0.34□□□□□ -2.36
VAPBO95292 DAP3P1-201ENST00000441522 278 ntBASIC0.34□□□□□ -2.36
VAPBO95292 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.34□□□□□ -2.36
VAPBO95292 AC093303.1-201ENST00000514549 295 ntBASIC0.34□□□□□ -2.36
VAPBO95292 RNU6-1278P-201ENST00000516130 107 ntBASIC0.34□□□□□ -2.36
VAPBO95292 RNU6-1291P-201ENST00000516591 104 ntBASIC0.34□□□□□ -2.36
VAPBO95292 RNU6-405P-201ENST00000516637 110 ntBASIC0.34□□□□□ -2.36
VAPBO95292 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.34□□□□□ -2.36
VAPBO95292 MIR3684-201ENST00000579779 74 ntBASIC0.34□□□□□ -2.36
VAPBO95292 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.34□□□□□ -2.36
VAPBO95292 PIGPP4-201ENST00000584447 307 ntBASIC0.34□□□□□ -2.36
VAPBO95292 AC073648.5-201ENST00000603502 305 ntBASIC0.34□□□□□ -2.36
VAPBO95292 AC093424.1-201ENST00000604999 338 ntBASIC0.34□□□□□ -2.36
VAPBO95292 AC009248.2-201ENST00000619826 254 ntBASIC0.34□□□□□ -2.36
VAPBO95292 Y_RNA.1-201ENST00000352915 104 ntBASIC0.33□□□□□ -2.36
VAPBO95292 RNU6-407P-201ENST00000365280 104 ntBASIC0.33□□□□□ -2.36
VAPBO95292 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
VAPBO95292 MIR452-201ENST00000385020 85 ntBASIC0.33□□□□□ -2.36
VAPBO95292 RNU1-139P-201ENST00000391307 165 ntBASIC0.33□□□□□ -2.36
VAPBO95292 MIR1185-1-201ENST00000408598 86 ntBASIC0.33□□□□□ -2.36
VAPBO95292 ZNF885P-201ENST00000420174 1098 ntBASIC0.33□□□□□ -2.36
VAPBO95292 MTCYBP10-201ENST00000424905 650 ntBASIC0.33□□□□□ -2.36
VAPBO95292 MTCO2P30-201ENST00000503662 364 ntBASIC0.33□□□□□ -2.36
VAPBO95292 CYCTP-201ENST00000504253 315 ntBASIC0.33□□□□□ -2.36
VAPBO95292 RNU6-496P-201ENST00000516145 99 ntBASIC0.33□□□□□ -2.36
VAPBO95292 RN7SKP12-201ENST00000516275 143 ntBASIC0.33□□□□□ -2.36
VAPBO95292 RN7SKP287-201ENST00000516546 266 ntBASIC0.33□□□□□ -2.36
VAPBO95292 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.33□□□□□ -2.36
VAPBO95292 MIR4528-201ENST00000577763 90 ntBASIC0.33□□□□□ -2.36
VAPBO95292 POLR3GP2-201ENST00000588366 668 ntBASIC0.33□□□□□ -2.36
VAPBO95292 AL008636.1-201ENST00000625038 1018 ntBASIC0.33□□□□□ -2.36
VAPBO95292 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
VAPBO95292 Y_RNA.296-201ENST00000364930 108 ntBASIC0.32□□□□□ -2.36
VAPBO95292 RNU6-128P-201ENST00000383976 107 ntBASIC0.32□□□□□ -2.36
VAPBO95292 CALM2P3-201ENST00000400429 449 ntBASIC0.32□□□□□ -2.36
VAPBO95292 MIR936-201ENST00000401264 98 ntBASIC0.32□□□□□ -2.36
VAPBO95292 MTCYBP4-201ENST00000401524 249 ntBASIC0.32□□□□□ -2.36
VAPBO95292 RN7SKP142-201ENST00000411236 328 ntBASIC0.32□□□□□ -2.36
VAPBO95292 Z98949.2-201ENST00000440996 144 ntBASIC0.32□□□□□ -2.36
VAPBO95292 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.32□□□□□ -2.36
VAPBO95292 PCMTD1P1-201ENST00000455560 355 ntBASIC0.32□□□□□ -2.36
VAPBO95292 RNU7-187P-201ENST00000458985 68 ntBASIC0.32□□□□□ -2.36
VAPBO95292 RPS3AP17-201ENST00000472594 777 ntBASIC0.32□□□□□ -2.36
VAPBO95292 RNU6-94P-201ENST00000607728 107 ntBASIC0.32□□□□□ -2.36
VAPBO95292 Z69908.1-201ENST00000622603 247 ntBASIC0.32□□□□□ -2.36
VAPBO95292 MTND5P16-201ENST00000460269 1703 ntBASIC0.32□□□□□ -2.36
VAPBO95292 AC134026.1-201ENST00000623249 2239 ntBASIC0.32□□□□□ -2.36
VAPBO95292 SNORA25.3-201ENST00000363205 127 ntBASIC0.31□□□□□ -2.36
VAPBO95292 RNY1-201ENST00000364228 113 ntBASIC0.31□□□□□ -2.36
VAPBO95292 RNY1P8-201ENST00000383970 114 ntBASIC0.31□□□□□ -2.36
VAPBO95292 SNORA20B-201ENST00000384220 132 ntBASIC0.31□□□□□ -2.36
VAPBO95292 MIR598-201ENST00000384868 97 ntBASIC0.31□□□□□ -2.36
VAPBO95292 MIR520G-201ENST00000385064 90 ntBASIC0.31□□□□□ -2.36
VAPBO95292 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.31□□□□□ -2.36
VAPBO95292 RPS20P10-201ENST00000451209 253 ntBASIC0.31□□□□□ -2.36
VAPBO95292 RNU6-1132P-201ENST00000459214 107 ntBASIC0.31□□□□□ -2.36
VAPBO95292 RPL30P10-201ENST00000488148 337 ntBASIC0.31□□□□□ -2.36
VAPBO95292 AC018710.1-201ENST00000506509 158 ntBASIC0.31□□□□□ -2.36
VAPBO95292 RNA5SP20-201ENST00000515976 84 ntBASIC0.31□□□□□ -2.36
VAPBO95292 MIR4711-201ENST00000578274 70 ntBASIC0.31□□□□□ -2.36
VAPBO95292 AC120024.3-201ENST00000603167 156 ntBASIC0.31□□□□□ -2.36
VAPBO95292 AC010999.1-201ENST00000611856 324 ntBASIC0.31□□□□□ -2.36
VAPBO95292 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
VAPBO95292 RNU4-41P-201ENST00000364426 143 ntBASIC0.3□□□□□ -2.36
VAPBO95292 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.3□□□□□ -2.36
VAPBO95292 AC018865.2-201ENST00000423631 129 ntBASIC0.3□□□□□ -2.36
VAPBO95292 MTCO2P12-201ENST00000427426 682 ntBASIC0.3□□□□□ -2.36
VAPBO95292 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
VAPBO95292 ACA59.1-201ENST00000515966 143 ntBASIC0.3□□□□□ -2.36
VAPBO95292 AC134698.4-201ENST00000523451 826 ntBASIC0.3□□□□□ -2.36
VAPBO95292 AL358944.1-201ENST00000528537 144 ntBASIC0.3□□□□□ -2.36
VAPBO95292 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.3□□□□□ -2.36
VAPBO95292 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.3□□□□□ -2.36
VAPBO95292 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.3□□□□□ -2.36
VAPBO95292 AC027279.3-201ENST00000625055 122 ntBASIC0.3□□□□□ -2.36
VAPBO95292 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.29□□□□□ -2.36
VAPBO95292 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.29□□□□□ -2.36
VAPBO95292 RNU6-1297P-201ENST00000384415 104 ntBASIC0.29□□□□□ -2.36
VAPBO95292 MIR520C-201ENST00000385005 87 ntBASIC0.29□□□□□ -2.36
VAPBO95292 SNORD111-201ENST00000408139 94 ntBASIC0.29□□□□□ -2.36
VAPBO95292 RNA5SP193-201ENST00000410353 107 ntBASIC0.29□□□□□ -2.36
VAPBO95292 RNU5A-5P-201ENST00000411054 116 ntBASIC0.29□□□□□ -2.36
VAPBO95292 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
VAPBO95292 RNU6-261P-201ENST00000459506 102 ntBASIC0.29□□□□□ -2.36
VAPBO95292 RN7SKP164-201ENST00000516138 266 ntBASIC0.29□□□□□ -2.36
VAPBO95292 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
VAPBO95292 Y_RNA.683-201ENST00000516508 93 ntBASIC0.29□□□□□ -2.36
VAPBO95292 AC100810.6-201ENST00000638068 285 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms