Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 AC008269.2-201ENST00000561915 1105 ntBASIC2.15□□□□□ -2.07
CCNT1O60563 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.15□□□□□ -2.07
CCNT1O60563 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCNT1O60563 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCNT1O60563 SNORD113-8-201ENST00000363497 74 ntBASIC2.14□□□□□ -2.07
CCNT1O60563 SNORA16B-201ENST00000364674 135 ntBASIC2.14□□□□□ -2.07
CCNT1O60563 Y_RNA.446-201ENST00000384178 104 ntBASIC2.14□□□□□ -2.07
CCNT1O60563 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CCNT1O60563 AL355796.1-201ENST00000406706 323 ntBASIC2.14□□□□□ -2.07
CCNT1O60563 MIR1261-201ENST00000408659 82 ntBASIC2.14□□□□□ -2.07
CCNT1O60563 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.14□□□□□ -2.07
CCNT1O60563 HMGN2P34-201ENST00000437647 269 ntBASIC2.14□□□□□ -2.07
CCNT1O60563 DYNLT3P2-201ENST00000442517 295 ntBASIC2.14□□□□□ -2.07
CCNT1O60563 RNU1-131P-201ENST00000458943 161 ntBASIC2.14□□□□□ -2.07
CCNT1O60563 SNORD65B-201ENST00000459126 73 ntBASIC2.14□□□□□ -2.07
CCNT1O60563 AC011406.1-201ENST00000512440 370 ntBASIC2.14□□□□□ -2.07
CCNT1O60563 AL117187.1-201ENST00000555482 181 ntBASIC2.14□□□□□ -2.07
CCNT1O60563 AC110588.1-201ENST00000559699 137 ntBASIC2.14□□□□□ -2.07
CCNT1O60563 CENPCP1-201ENST00000533085 2578 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CCNT1O60563 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CCNT1O60563 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CCNT1O60563 Y_RNA.124-201ENST00000363339 93 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 RNU6-770P-201ENST00000363929 105 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 Y_RNA.230-201ENST00000364348 109 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 Y_RNA.331-201ENST00000365267 102 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 RNU6-417P-201ENST00000384712 107 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 RNU6-1105P-201ENST00000384774 107 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 RNU6-1109P-201ENST00000391187 107 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 AL358176.2-201ENST00000425769 204 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 AC003989.2-201ENST00000440224 169 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 ATP5J2P3-201ENST00000451550 258 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 HMGN1P10-201ENST00000474557 553 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 YWHAEP4-201ENST00000505390 198 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.13□□□□□ -2.07
CCNT1O60563 U6.115-201ENST00000636045 103 ntBASIC2.13□□□□□ -2.07
CCNT1O60563 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCNT1O60563 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CCNT1O60563 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 Y_RNA.152-201ENST00000363578 100 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 SNORD115-30-201ENST00000364117 82 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 Y_RNA.287-201ENST00000364853 94 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 RNU6-1240P-201ENST00000365155 104 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 RNU6-1310P-201ENST00000384153 107 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 SNORA20B-201ENST00000384220 132 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 MIR17-201ENST00000385012 84 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 SNORD115-46-201ENST00000390982 71 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 RNA5SP450-201ENST00000411206 102 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.12□□□□□ -2.07
CCNT1O60563 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.12□□□□□ -2.07
CCNT1O60563 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.12□□□□□ -2.07
CCNT1O60563 snoU13.15-201ENST00000459407 104 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 HMGB3P17-201ENST00000504195 649 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCNT1O60563 AC025465.3-201ENST00000510570 311 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 Y_RNA.713-201ENST00000517013 96 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 AC023157.2-201ENST00000540596 141 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 MIR3145-201ENST00000580727 82 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 AC022441.3-201ENST00000605737 136 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 AC011373.1-201ENST00000607270 237 ntBASIC2.12□□□□□ -2.07
CCNT1O60563 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCNT1O60563 RNU6-862P-201ENST00000362804 105 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 snoU2_19.2-201ENST00000363024 80 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 SNORD81.1-201ENST00000363064 77 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 Y_RNA.276-201ENST00000364732 109 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 SNORD63-201ENST00000384262 68 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 Y_RNA.462-201ENST00000384268 102 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 AL117342.1-201ENST00000404861 406 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 RNU2-54P-201ENST00000410299 190 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 AC099677.2-201ENST00000436385 175 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 HSPE1P25-201ENST00000455484 251 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 RNU6-570P-201ENST00000517051 105 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 SUMO2P18-201ENST00000518873 252 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 AP003733.2-201ENST00000529409 171 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.11□□□□□ -2.07
CCNT1O60563 MIR338-201ENST00000636369 67 ntBASIC2.11□□□□□ -2.07
CCNT1O60563 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCNT1O60563 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
CCNT1O60563 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCNT1O60563 RNU6-1266P-201ENST00000362794 105 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 snoU2-30.2-201ENST00000362805 70 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 RNU6-324P-201ENST00000363957 106 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 RNU6-21P-201ENST00000384710 107 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 MIR1253-201ENST00000408273 105 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 RNU5A-5P-201ENST00000411054 116 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.1□□□□□ -2.07
CCNT1O60563 AC008134.1-201ENST00000420943 193 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 AL121890.1-201ENST00000435457 205 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 AL353689.1-201ENST00000438895 199 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 AL731563.1-201ENST00000442202 214 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 AC055731.1-201ENST00000474387 401 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 RNVU1-2-201ENST00000516326 135 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.1□□□□□ -2.07
CCNT1O60563 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.1□□□□□ -2.07
CCNT1O60563 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.1□□□□□ -2.07
CCNT1O60563 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.1□□□□□ -2.07
CCNT1O60563 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
CCNT1O60563 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCNT1O60563 AC009487.4-201ENST00000624969 3585 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms