Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 snoU18.1-201ENST00000629629 71 ntBASIC2.66□□□□□ -1.98
KDM1AO60341 CENPCP1-201ENST00000533085 2578 ntBASIC2.66□□□□□ -1.98
KDM1AO60341 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.66□□□□□ -1.98
KDM1AO60341 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
KDM1AO60341 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.98
KDM1AO60341 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
KDM1AO60341 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KDM1AO60341 RNU6-859P-201ENST00000362728 107 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 SNORA5B-201ENST00000363786 132 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 Y_RNA.199-201ENST00000364014 102 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 RNU1-91P-201ENST00000364746 163 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 Y_RNA.310-201ENST00000365063 113 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 RNY4P28-201ENST00000365281 93 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 RNU6-211P-201ENST00000384047 107 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 SNORA72.4-201ENST00000384174 132 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 MIR23A-201ENST00000385245 73 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 RNU6-763P-201ENST00000390865 106 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 MIR1253-201ENST00000408273 105 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 AC010154.1-201ENST00000425857 269 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 AC063976.3-201ENST00000426849 329 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 Z98949.2-201ENST00000440996 144 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 RPS27P22-201ENST00000478056 241 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 AC096725.1-201ENST00000514266 313 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 RNU6-1337P-201ENST00000516525 95 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 SUMO2P18-201ENST00000518873 252 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 MIR4658-201ENST00000584344 65 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 AC011921.3-201ENST00000605540 361 ntBASIC2.65□□□□□ -1.99
KDM1AO60341 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KDM1AO60341 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
KDM1AO60341 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
KDM1AO60341 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KDM1AO60341 MIR411-201ENST00000362239 96 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 Y_RNA.83-201ENST00000363005 113 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 RNU6-801P-201ENST00000364087 105 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 Y_RNA.287-201ENST00000364853 94 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 Y_RNA.297-201ENST00000364950 91 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 MIR181A2-201ENST00000384863 110 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 SNORA26.5-201ENST00000391215 123 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 Y_RNA.626-201ENST00000411288 95 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.64□□□□□ -1.99
KDM1AO60341 Y_RNA.637-201ENST00000459424 114 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.64□□□□□ -1.99
KDM1AO60341 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.64□□□□□ -1.99
KDM1AO60341 AC011406.1-201ENST00000512440 370 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 RNU6-1146P-201ENST00000516282 102 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 MIR3126-201ENST00000577443 74 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 MIR5694-201ENST00000581190 76 ntBASIC2.64□□□□□ -1.99
KDM1AO60341 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.64□□□□□ -1.99
KDM1AO60341 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KDM1AO60341 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KDM1AO60341 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.63□□□□□ -1.99
KDM1AO60341 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.63□□□□□ -1.99
KDM1AO60341 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KDM1AO60341 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
KDM1AO60341 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KDM1AO60341 snoU2-30.2-201ENST00000362805 70 ntBASIC2.63□□□□□ -1.99
KDM1AO60341 SNORA80A-201ENST00000363922 136 ntBASIC2.63□□□□□ -1.99
KDM1AO60341 SNORD114-6-201ENST00000364393 72 ntBASIC2.63□□□□□ -1.99
KDM1AO60341 RNA5SP184-201ENST00000411071 108 ntBASIC2.63□□□□□ -1.99
KDM1AO60341 HMGN2P34-201ENST00000437647 269 ntBASIC2.63□□□□□ -1.99
KDM1AO60341 RPS20P10-201ENST00000451209 253 ntBASIC2.63□□□□□ -1.99
KDM1AO60341 IGLV3-17-201ENST00000519099 244 ntBASIC2.63□□□□□ -1.99
KDM1AO60341 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.63□□□□□ -1.99
KDM1AO60341 AL137100.2-201ENST00000555786 315 ntBASIC2.63□□□□□ -1.99
KDM1AO60341 MIR4438-201ENST00000585271 93 ntBASIC2.63□□□□□ -1.99
KDM1AO60341 AL353149.1-201ENST00000610667 244 ntBASIC2.63□□□□□ -1.99
KDM1AO60341 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KDM1AO60341 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KDM1AO60341 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.63□□□□□ -1.99
KDM1AO60341 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KDM1AO60341 AL356292.1-201ENST00000283110 373 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 MIR6073-201ENST00000352083 89 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 Y_RNA.172-201ENST00000363765 102 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 Y_RNA.304-201ENST00000365011 112 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 Y_RNA.785-201ENST00000384290 109 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 SNORD116-13-201ENST00000384408 92 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 MIR29C-201ENST00000385231 88 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 RNU2-64P-201ENST00000411315 191 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 RN7SL636P-201ENST00000497504 294 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 AC097462.1-201ENST00000514125 324 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 RNA5SP402-201ENST00000517148 110 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 AP005660.1-201ENST00000522972 293 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 AC004832.4-201ENST00000608952 331 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 AC022202.1-201ENST00000613515 211 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 SCARNA15.3-201ENST00000626315 122 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 SCARNA4.1-201ENST00000628597 123 ntBASIC2.62□□□□□ -1.99
KDM1AO60341 SNORD115-3-201ENST00000363100 82 ntBASIC2.61□□□□□ -1.99
KDM1AO60341 RNU1-22P-201ENST00000363334 158 ntBASIC2.61□□□□□ -1.99
KDM1AO60341 RNU6-1164P-201ENST00000364428 107 ntBASIC2.61□□□□□ -1.99
KDM1AO60341 SNORA80E-201ENST00000384744 137 ntBASIC2.61□□□□□ -1.99
KDM1AO60341 ATP5J2P3-201ENST00000451550 258 ntBASIC2.61□□□□□ -1.99
KDM1AO60341 RPL36AP21-201ENST00000490372 323 ntBASIC2.61□□□□□ -1.99
KDM1AO60341 RNA5SP137-201ENST00000516833 135 ntBASIC2.61□□□□□ -1.99
KDM1AO60341 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
KDM1AO60341 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
KDM1AO60341 Y_RNA.29-201ENST00000362570 113 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 RNU6-23P-201ENST00000363283 107 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 RNU6-1048P-201ENST00000364054 107 ntBASIC2.6□□□□□ -1.99
KDM1AO60341 RNA5SP493-201ENST00000364115 91 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 313.7 ms