Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-1235P-201ENST00000384559 107 ntBASIC1.89□□□□□ -2.11
PRKNO60260 MT-TW-201ENST00000387382 68 ntBASIC1.89□□□□□ -2.11
PRKNO60260 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
PRKNO60260 MTCO1P44-201ENST00000441935 243 ntBASIC1.89□□□□□ -2.11
PRKNO60260 RNU6-498P-201ENST00000459468 107 ntBASIC1.89□□□□□ -2.11
PRKNO60260 HMGB3P17-201ENST00000504195 649 ntBASIC1.89□□□□□ -2.11
PRKNO60260 RNU6-496P-201ENST00000516145 99 ntBASIC1.89□□□□□ -2.11
PRKNO60260 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PRKNO60260 AC110588.1-201ENST00000559699 137 ntBASIC1.89□□□□□ -2.11
PRKNO60260 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.89□□□□□ -2.11
PRKNO60260 AC026271.5-201ENST00000577873 130 ntBASIC1.89□□□□□ -2.11
PRKNO60260 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.89□□□□□ -2.11
PRKNO60260 AC022441.3-201ENST00000605737 136 ntBASIC1.89□□□□□ -2.11
PRKNO60260 SNORD113-5-201ENST00000607261 78 ntBASIC1.89□□□□□ -2.11
PRKNO60260 AC006001.4-201ENST00000622243 395 ntBASIC1.89□□□□□ -2.11
PRKNO60260 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.89□□□□□ -2.11
PRKNO60260 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.89□□□□□ -2.11
PRKNO60260 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PRKNO60260 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PRKNO60260 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
PRKNO60260 Y_RNA.84-201ENST00000363011 104 ntBASIC1.88□□□□□ -2.11
PRKNO60260 Y_RNA.99-201ENST00000363138 105 ntBASIC1.88□□□□□ -2.11
PRKNO60260 Y_RNA.483-201ENST00000384380 101 ntBASIC1.88□□□□□ -2.11
PRKNO60260 Y_RNA.541-201ENST00000384640 113 ntBASIC1.88□□□□□ -2.11
PRKNO60260 MT-TG-201ENST00000387429 68 ntBASIC1.88□□□□□ -2.11
PRKNO60260 Y_RNA.581-201ENST00000391017 97 ntBASIC1.88□□□□□ -2.11
PRKNO60260 AL355497.1-201ENST00000406262 551 ntBASIC1.88□□□□□ -2.11
PRKNO60260 MIR1289-2-201ENST00000408360 111 ntBASIC1.88□□□□□ -2.11
PRKNO60260 MIR1302-6-201ENST00000408466 90 ntBASIC1.88□□□□□ -2.11
PRKNO60260 RNU2-54P-201ENST00000410299 190 ntBASIC1.88□□□□□ -2.11
PRKNO60260 Y_RNA.618-201ENST00000410949 107 ntBASIC1.88□□□□□ -2.11
PRKNO60260 RPL23AP36-201ENST00000413895 458 ntBASIC1.88□□□□□ -2.11
PRKNO60260 EDDM3CP-201ENST00000415977 425 ntBASIC1.88□□□□□ -2.11
PRKNO60260 AL390729.2-201ENST00000416137 156 ntBASIC1.88□□□□□ -2.11
PRKNO60260 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.88□□□□□ -2.11
PRKNO60260 AC005042.3-201ENST00000453230 174 ntBASIC1.88□□□□□ -2.11
PRKNO60260 HSPE1P25-201ENST00000455484 251 ntBASIC1.88□□□□□ -2.11
PRKNO60260 RNU6-221P-201ENST00000459541 99 ntBASIC1.88□□□□□ -2.11
PRKNO60260 TRBVB-201ENST00000477100 408 ntBASIC1.88□□□□□ -2.11
PRKNO60260 SEPT14P8-201ENST00000508026 178 ntBASIC1.88□□□□□ -2.11
PRKNO60260 RNU2-12P-201ENST00000517216 168 ntBASIC1.88□□□□□ -2.11
PRKNO60260 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
PRKNO60260 AC006380.1-201ENST00000603598 186 ntBASIC1.88□□□□□ -2.11
PRKNO60260 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.88□□□□□ -2.11
PRKNO60260 MIR6840-201ENST00000611937 71 ntBASIC1.88□□□□□ -2.11
PRKNO60260 AC009487.4-201ENST00000624969 3585 ntBASIC1.88□□□□□ -2.11
PRKNO60260 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PRKNO60260 RNU4-90P-201ENST00000362773 141 ntBASIC1.87□□□□□ -2.11
PRKNO60260 SNORD114-6-201ENST00000364393 72 ntBASIC1.87□□□□□ -2.11
PRKNO60260 Y_RNA.518-201ENST00000384552 113 ntBASIC1.87□□□□□ -2.11
PRKNO60260 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
PRKNO60260 RNU6-1199P-201ENST00000411249 104 ntBASIC1.87□□□□□ -2.11
PRKNO60260 HMGN2P3-201ENST00000433603 273 ntBASIC1.87□□□□□ -2.11
PRKNO60260 HMGN2P5-201ENST00000436882 273 ntBASIC1.87□□□□□ -2.11
PRKNO60260 AL357134.1-201ENST00000445848 426 ntBASIC1.87□□□□□ -2.11
PRKNO60260 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
PRKNO60260 AC079804.2-201ENST00000490376 200 ntBASIC1.87□□□□□ -2.11
PRKNO60260 RNU2-34P-201ENST00000516534 121 ntBASIC1.87□□□□□ -2.11
PRKNO60260 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.87□□□□□ -2.11
PRKNO60260 AC027419.1-201ENST00000522976 328 ntBASIC1.87□□□□□ -2.11
PRKNO60260 AC023157.2-201ENST00000540596 141 ntBASIC1.87□□□□□ -2.11
PRKNO60260 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.87□□□□□ -2.11
PRKNO60260 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.87□□□□□ -2.11
PRKNO60260 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.87□□□□□ -2.11
PRKNO60260 AC008749.1-201ENST00000597650 306 ntBASIC1.87□□□□□ -2.11
PRKNO60260 AL031274.2-201ENST00000599419 203 ntBASIC1.87□□□□□ -2.11
PRKNO60260 AC062037.2-201ENST00000610137 73 ntBASIC1.87□□□□□ -2.11
PRKNO60260 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
PRKNO60260 Y_RNA.16-201ENST00000362421 102 ntBASIC1.86□□□□□ -2.11
PRKNO60260 Y_RNA.188-201ENST00000363952 111 ntBASIC1.86□□□□□ -2.11
PRKNO60260 RNU6-324P-201ENST00000363957 106 ntBASIC1.86□□□□□ -2.11
PRKNO60260 Y_RNA.288-201ENST00000364854 92 ntBASIC1.86□□□□□ -2.11
PRKNO60260 Y_RNA.307-201ENST00000365022 117 ntBASIC1.86□□□□□ -2.11
PRKNO60260 RNU6-160P-201ENST00000384591 107 ntBASIC1.86□□□□□ -2.11
PRKNO60260 RNU6-1203P-201ENST00000410703 110 ntBASIC1.86□□□□□ -2.11
PRKNO60260 AC096920.1-201ENST00000423991 241 ntBASIC1.86□□□□□ -2.11
PRKNO60260 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.86□□□□□ -2.11
PRKNO60260 AL021397.1-201ENST00000451806 248 ntBASIC1.86□□□□□ -2.11
PRKNO60260 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PRKNO60260 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.86□□□□□ -2.11
PRKNO60260 AC025647.1-201ENST00000517879 253 ntBASIC1.86□□□□□ -2.11
PRKNO60260 AL590240.4-201ENST00000616908 390 ntBASIC1.86□□□□□ -2.11
PRKNO60260 U6.115-201ENST00000636045 103 ntBASIC1.86□□□□□ -2.11
PRKNO60260 U6.104-201ENST00000637979 90 ntBASIC1.86□□□□□ -2.11
PRKNO60260 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PRKNO60260 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PRKNO60260 AL596028.1-201ENST00000326971 197 ntBASIC1.85□□□□□ -2.11
PRKNO60260 RNU6-1266P-201ENST00000362794 105 ntBASIC1.85□□□□□ -2.11
PRKNO60260 SNORD81.1-201ENST00000363064 77 ntBASIC1.85□□□□□ -2.11
PRKNO60260 RNU6-290P-201ENST00000365212 101 ntBASIC1.85□□□□□ -2.11
PRKNO60260 Y_RNA.383-201ENST00000383855 97 ntBASIC1.85□□□□□ -2.11
PRKNO60260 U3.40-201ENST00000408706 208 ntBASIC1.85□□□□□ -2.11
PRKNO60260 RNU2-38P-201ENST00000410856 79 ntBASIC1.85□□□□□ -2.11
PRKNO60260 AC016909.1-201ENST00000415916 166 ntBASIC1.85□□□□□ -2.11
PRKNO60260 POLR2KP2-201ENST00000438155 177 ntBASIC1.85□□□□□ -2.11
PRKNO60260 AC003989.2-201ENST00000440224 169 ntBASIC1.85□□□□□ -2.11
PRKNO60260 MRPS10P1-201ENST00000448483 130 ntBASIC1.85□□□□□ -2.11
PRKNO60260 AC245102.2-201ENST00000448956 180 ntBASIC1.85□□□□□ -2.11
PRKNO60260 RNU7-193P-201ENST00000516723 65 ntBASIC1.85□□□□□ -2.11
PRKNO60260 RNU6-856P-201ENST00000516959 98 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms