Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 RNU6-601P-201ENST00000384540 107 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 MIR660-201ENST00000385235 97 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.03□□□□□ -2.24
CXCL13O43927 AL355796.1-201ENST00000406706 323 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 ELOCP21-201ENST00000412558 336 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 MTCO3P19-201ENST00000415864 321 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 AC015922.2-201ENST00000435593 184 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.03□□□□□ -2.24
CXCL13O43927 AC107399.1-201ENST00000451226 265 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 AL133373.1-201ENST00000497098 94 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 Y_RNA.708-201ENST00000516950 96 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 RNU7-172P-201ENST00000517125 64 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 SNORA28-201ENST00000606769 126 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 AL357075.2-201ENST00000614906 189 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 AC106754.2-201ENST00000623006 233 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 AC068647.2-201ENST00000637380 353 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 AC073544.1-201ENST00000600110 1595 ntBASIC1.03□□□□□ -2.24
CXCL13O43927 Y_RNA.4-201ENST00000362333 112 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 RNU6-874P-201ENST00000362390 105 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 RNA5SP361-201ENST00000362686 118 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 RNU1-22P-201ENST00000363334 158 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 RNU4-76P-201ENST00000364509 141 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 RNU6-407P-201ENST00000365280 104 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CXCL13O43927 RNU6-1145P-201ENST00000384246 107 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 RNU6-505P-201ENST00000384427 107 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 RNU6-939P-201ENST00000384634 107 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 MIR618-201ENST00000385287 98 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 RNU11-5P-201ENST00000391216 129 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 MTCYBP4-201ENST00000401524 249 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 UBE2V1P7-201ENST00000446395 340 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.02□□□□□ -2.25
CXCL13O43927 RPL7P42-201ENST00000481005 679 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 HMGN1P7-201ENST00000491722 313 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 RNU6-165P-201ENST00000517170 99 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.02□□□□□ -2.25
CXCL13O43927 RPL21P9-201ENST00000556149 474 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 MIR3684-201ENST00000579779 74 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 AC080078.3-201ENST00000605407 463 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 AC009229.3-201ENST00000608056 282 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.02□□□□□ -2.25
CXCL13O43927 AC104260.1-201ENST00000616660 539 ntBASIC1.02□□□□□ -2.25
CXCL13O43927 Y_RNA.265-201ENST00000364677 108 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 Y_RNA.557-201ENST00000384680 107 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 RPL37P10-201ENST00000412884 288 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.01□□□□□ -2.25
CXCL13O43927 AC069439.1-201ENST00000494739 167 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.01□□□□□ -2.25
CXCL13O43927 AC074133.1-201ENST00000515696 183 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 RNA5SP20-201ENST00000515976 84 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 RNU7-40P-201ENST00000516397 64 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 RNU6-922P-201ENST00000516753 99 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 RNU2-56P-201ENST00000516826 190 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 MIR4778-201ENST00000577635 80 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 AC011712.1-201ENST00000588959 234 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 AC060780.3-201ENST00000589464 80 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.01□□□□□ -2.25
CXCL13O43927 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.01□□□□□ -2.25
CXCL13O43927 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.01□□□□□ -2.25
CXCL13O43927 AC091812.1-201ENST00000432235 1948 ntBASIC1□□□□□ -2.25
CXCL13O43927 Y_RNA.339-201ENST00000365325 102 ntBASIC1□□□□□ -2.25
CXCL13O43927 Y_RNA.498-201ENST00000384460 102 ntBASIC1□□□□□ -2.25
CXCL13O43927 AL591704.2-201ENST00000421658 181 ntBASIC1□□□□□ -2.25
CXCL13O43927 AC018865.2-201ENST00000423631 129 ntBASIC1□□□□□ -2.25
CXCL13O43927 AC092423.1-201ENST00000430165 186 ntBASIC1□□□□□ -2.25
CXCL13O43927 DYNLT3P2-201ENST00000442517 295 ntBASIC1□□□□□ -2.25
CXCL13O43927 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1□□□□□ -2.25
CXCL13O43927 MTND3P10-201ENST00000450967 341 ntBASIC1□□□□□ -2.25
CXCL13O43927 PCNPP5-201ENST00000452246 481 ntBASIC1□□□□□ -2.25
CXCL13O43927 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1□□□□□ -2.25
CXCL13O43927 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1□□□□□ -2.25
CXCL13O43927 U8.22-201ENST00000459141 133 ntBASIC1□□□□□ -2.25
CXCL13O43927 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1□□□□□ -2.25
CXCL13O43927 AC022868.1-201ENST00000517767 391 ntBASIC1□□□□□ -2.25
CXCL13O43927 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1□□□□□ -2.25
CXCL13O43927 AC018448.1-201ENST00000552843 316 ntBASIC1□□□□□ -2.25
CXCL13O43927 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
CXCL13O43927 AL513534.2-201ENST00000603836 250 ntBASIC1□□□□□ -2.25
CXCL13O43927 PISRT1.1-201ENST00000616930 107 ntBASIC1□□□□□ -2.25
CXCL13O43927 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1□□□□□ -2.25
CXCL13O43927 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1□□□□□ -2.25
CXCL13O43927 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
CXCL13O43927 SNORA27.1-201ENST00000362604 124 ntBASIC0.99□□□□□ -2.25
CXCL13O43927 Y_RNA.267-201ENST00000364679 109 ntBASIC0.99□□□□□ -2.25
CXCL13O43927 Y_RNA.358-201ENST00000365491 99 ntBASIC0.99□□□□□ -2.25
CXCL13O43927 Y_RNA.482-201ENST00000384377 111 ntBASIC0.99□□□□□ -2.25
CXCL13O43927 RNU6-376P-201ENST00000384731 106 ntBASIC0.99□□□□□ -2.25
CXCL13O43927 FCF1P9-201ENST00000412546 282 ntBASIC0.99□□□□□ -2.25
CXCL13O43927 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.99□□□□□ -2.25
CXCL13O43927 AC091021.1-201ENST00000468051 388 ntBASIC0.99□□□□□ -2.25
CXCL13O43927 COX6CP14-201ENST00000469580 174 ntBASIC0.99□□□□□ -2.25
CXCL13O43927 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.99□□□□□ -2.25
CXCL13O43927 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.99□□□□□ -2.25
CXCL13O43927 RN7SKP179-201ENST00000516126 217 ntBASIC0.99□□□□□ -2.25
CXCL13O43927 RN7SKP49-201ENST00000516675 260 ntBASIC0.99□□□□□ -2.25
CXCL13O43927 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.99□□□□□ -2.25
CXCL13O43927 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.99□□□□□ -2.25
CXCL13O43927 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.99□□□□□ -2.25
CXCL13O43927 AC084782.3-201ENST00000612282 578 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms