Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNU6-342P-201ENST00000384521 104 ntBASIC0.21□□□□□ -2.38
SGCEO43556 MIR216A-201ENST00000385063 110 ntBASIC0.21□□□□□ -2.38
SGCEO43556 MIR520G-201ENST00000385064 90 ntBASIC0.21□□□□□ -2.38
SGCEO43556 SNORA26.8-201ENST00000391306 124 ntBASIC0.21□□□□□ -2.38
SGCEO43556 MTCYBP4-201ENST00000401524 249 ntBASIC0.21□□□□□ -2.38
SGCEO43556 MTATP6P19-201ENST00000413797 659 ntBASIC0.21□□□□□ -2.38
SGCEO43556 MRPS18CP6-201ENST00000423587 223 ntBASIC0.21□□□□□ -2.38
SGCEO43556 AC073464.1-201ENST00000429823 534 ntBASIC0.21□□□□□ -2.38
SGCEO43556 Z82188.1-201ENST00000436709 154 ntBASIC0.21□□□□□ -2.38
SGCEO43556 Z98949.2-201ENST00000440996 144 ntBASIC0.21□□□□□ -2.38
SGCEO43556 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.21□□□□□ -2.38
SGCEO43556 RNU6-1278P-201ENST00000516130 107 ntBASIC0.21□□□□□ -2.38
SGCEO43556 RNU6-1291P-201ENST00000516591 104 ntBASIC0.21□□□□□ -2.38
SGCEO43556 RNU6-107P-201ENST00000516643 102 ntBASIC0.21□□□□□ -2.38
SGCEO43556 RNU6-1332P-201ENST00000516666 104 ntBASIC0.21□□□□□ -2.38
SGCEO43556 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.21□□□□□ -2.38
SGCEO43556 AF235103.2-201ENST00000525753 346 ntBASIC0.21□□□□□ -2.38
SGCEO43556 AC036111.3-201ENST00000526389 112 ntBASIC0.21□□□□□ -2.38
SGCEO43556 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
SGCEO43556 AC120024.3-201ENST00000603167 156 ntBASIC0.21□□□□□ -2.38
SGCEO43556 RNU6-94P-201ENST00000607728 107 ntBASIC0.21□□□□□ -2.38
SGCEO43556 AC009248.2-201ENST00000619826 254 ntBASIC0.21□□□□□ -2.38
SGCEO43556 RNU4-41P-201ENST00000364426 143 ntBASIC0.2□□□□□ -2.38
SGCEO43556 RNU4-66P-201ENST00000365199 138 ntBASIC0.2□□□□□ -2.38
SGCEO43556 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
SGCEO43556 RNU6-1103P-201ENST00000384150 107 ntBASIC0.2□□□□□ -2.38
SGCEO43556 SNORA20B-201ENST00000384220 132 ntBASIC0.2□□□□□ -2.38
SGCEO43556 RNU6-790P-201ENST00000384479 105 ntBASIC0.2□□□□□ -2.38
SGCEO43556 MIR520C-201ENST00000385005 87 ntBASIC0.2□□□□□ -2.38
SGCEO43556 MIR140-201ENST00000385282 100 ntBASIC0.2□□□□□ -2.38
SGCEO43556 EIF4E2P1-201ENST00000393781 255 ntBASIC0.2□□□□□ -2.38
SGCEO43556 MIR1827-201ENST00000408549 66 ntBASIC0.2□□□□□ -2.38
SGCEO43556 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.2□□□□□ -2.38
SGCEO43556 NDUFA5P4-201ENST00000436704 385 ntBASIC0.2□□□□□ -2.38
SGCEO43556 RPS20P10-201ENST00000451209 253 ntBASIC0.2□□□□□ -2.38
SGCEO43556 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.2□□□□□ -2.38
SGCEO43556 RNA5SP401-201ENST00000515920 127 ntBASIC0.2□□□□□ -2.38
SGCEO43556 RNA5SP20-201ENST00000515976 84 ntBASIC0.2□□□□□ -2.38
SGCEO43556 RNU6-1116P-201ENST00000517269 99 ntBASIC0.2□□□□□ -2.38
SGCEO43556 AC091144.1-201ENST00000519573 138 ntBASIC0.2□□□□□ -2.38
SGCEO43556 MIR6515-201ENST00000619843 57 ntBASIC0.2□□□□□ -2.38
SGCEO43556 AL008636.1-201ENST00000625038 1018 ntBASIC0.2□□□□□ -2.38
SGCEO43556 AC100810.6-201ENST00000638068 285 ntBASIC0.2□□□□□ -2.38
SGCEO43556 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SGCEO43556 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
SGCEO43556 SNORA25.3-201ENST00000363205 127 ntBASIC0.19□□□□□ -2.38
SGCEO43556 Y_RNA.122-201ENST00000363331 96 ntBASIC0.19□□□□□ -2.38
SGCEO43556 RNA5SP48-201ENST00000363969 126 ntBASIC0.19□□□□□ -2.38
SGCEO43556 SNORD113.3-201ENST00000364630 78 ntBASIC0.19□□□□□ -2.38
SGCEO43556 RNU6-38P-201ENST00000384085 107 ntBASIC0.19□□□□□ -2.38
SGCEO43556 RNU6-348P-201ENST00000384386 107 ntBASIC0.19□□□□□ -2.38
SGCEO43556 CALM2P3-201ENST00000400429 449 ntBASIC0.19□□□□□ -2.38
SGCEO43556 RNU6-177P-201ENST00000411257 104 ntBASIC0.19□□□□□ -2.38
SGCEO43556 SNORA74.3-201ENST00000517108 154 ntBASIC0.19□□□□□ -2.38
SGCEO43556 AL118558.2-201ENST00000556294 238 ntBASIC0.19□□□□□ -2.38
SGCEO43556 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.19□□□□□ -2.38
SGCEO43556 AC040904.1-201ENST00000590850 223 ntBASIC0.19□□□□□ -2.38
SGCEO43556 Y_RNA.169-201ENST00000363745 96 ntBASIC0.18□□□□□ -2.38
SGCEO43556 SNORD113-7-201ENST00000363762 77 ntBASIC0.18□□□□□ -2.38
SGCEO43556 RNU6-407P-201ENST00000365280 104 ntBASIC0.18□□□□□ -2.38
SGCEO43556 RNU6-1297P-201ENST00000384415 104 ntBASIC0.18□□□□□ -2.38
SGCEO43556 RNU5A-5P-201ENST00000411054 116 ntBASIC0.18□□□□□ -2.38
SGCEO43556 AC018865.2-201ENST00000423631 129 ntBASIC0.18□□□□□ -2.38
SGCEO43556 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.18□□□□□ -2.38
SGCEO43556 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.18□□□□□ -2.38
SGCEO43556 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.18□□□□□ -2.38
SGCEO43556 RNU6-1208P-201ENST00000459588 107 ntBASIC0.18□□□□□ -2.38
SGCEO43556 MTCO2P30-201ENST00000503662 364 ntBASIC0.18□□□□□ -2.38
SGCEO43556 MIR4300-201ENST00000581016 96 ntBASIC0.18□□□□□ -2.38
SGCEO43556 Z94722.1-201ENST00000604328 474 ntBASIC0.18□□□□□ -2.38
SGCEO43556 AC010999.1-201ENST00000611856 324 ntBASIC0.18□□□□□ -2.38
SGCEO43556 MIR1-1-201ENST00000362147 71 ntBASIC0.17□□□□□ -2.38
SGCEO43556 RPL30P16-201ENST00000419341 429 ntBASIC0.17□□□□□ -2.38
SGCEO43556 MTCO1P20-201ENST00000425366 358 ntBASIC0.17□□□□□ -2.38
SGCEO43556 AL606489.2-201ENST00000433886 234 ntBASIC0.17□□□□□ -2.38
SGCEO43556 PCNPP5-201ENST00000452246 481 ntBASIC0.17□□□□□ -2.38
SGCEO43556 PCMTD1P1-201ENST00000455560 355 ntBASIC0.17□□□□□ -2.38
SGCEO43556 RN7SKP164-201ENST00000516138 266 ntBASIC0.17□□□□□ -2.38
SGCEO43556 SNORA40.12-201ENST00000516329 111 ntBASIC0.17□□□□□ -2.38
SGCEO43556 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.17□□□□□ -2.38
SGCEO43556 UBL5P4-201ENST00000562584 236 ntBASIC0.17□□□□□ -2.38
SGCEO43556 AC092807.2-201ENST00000609367 243 ntBASIC0.17□□□□□ -2.38
SGCEO43556 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.17□□□□□ -2.38
SGCEO43556 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
SGCEO43556 SNORA27.1-201ENST00000362604 124 ntBASIC0.16□□□□□ -2.38
SGCEO43556 SNORD14.1-201ENST00000365609 90 ntBASIC0.16□□□□□ -2.38
SGCEO43556 RNU6-128P-201ENST00000383976 107 ntBASIC0.16□□□□□ -2.38
SGCEO43556 MIR15B-201ENST00000385045 98 ntBASIC0.16□□□□□ -2.38
SGCEO43556 MIR136-201ENST00000385207 82 ntBASIC0.16□□□□□ -2.38
SGCEO43556 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.16□□□□□ -2.38
SGCEO43556 PIGPP3-201ENST00000425307 415 ntBASIC0.16□□□□□ -2.38
SGCEO43556 MTCO2P19-201ENST00000427513 598 ntBASIC0.16□□□□□ -2.38
SGCEO43556 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.16□□□□□ -2.38
SGCEO43556 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
SGCEO43556 AC018710.1-201ENST00000506509 158 ntBASIC0.16□□□□□ -2.38
SGCEO43556 RNU7-41P-201ENST00000515917 61 ntBASIC0.16□□□□□ -2.38
SGCEO43556 AC134698.4-201ENST00000523451 826 ntBASIC0.16□□□□□ -2.38
SGCEO43556 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.16□□□□□ -2.38
SGCEO43556 AC104695.3-201ENST00000604052 296 ntBASIC0.16□□□□□ -2.38
SGCEO43556 AC027449.1-201ENST00000608890 407 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms