Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 SNORD37.2-201ENST00000391075 66 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 AC097463.2-201ENST00000421074 142 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 AL137159.1-201ENST00000452808 512 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 HMGN2P9-201ENST00000476875 229 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 MIR449C-201ENST00000516047 92 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 RNU6-1098P-201ENST00000516772 96 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 RNU6-971P-201ENST00000516920 106 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.12□□□□□ -1.91
SRGAP3O43295 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.12□□□□□ -1.91
SRGAP3O43295 MIR4724-201ENST00000579485 89 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.12□□□□□ -1.91
SRGAP3O43295 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.12□□□□□ -1.91
SRGAP3O43295 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.12□□□□□ -1.91
SRGAP3O43295 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SRGAP3O43295 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SRGAP3O43295 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SRGAP3O43295 AL136164.4-201ENST00000625013 2135 ntBASIC3.11□□□□□ -1.91
SRGAP3O43295 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.11□□□□□ -1.91
SRGAP3O43295 Y_RNA.172-201ENST00000363765 102 ntBASIC3.11□□□□□ -1.91
SRGAP3O43295 RNU6-376P-201ENST00000384731 106 ntBASIC3.11□□□□□ -1.91
SRGAP3O43295 MIR15B-201ENST00000385045 98 ntBASIC3.11□□□□□ -1.91
SRGAP3O43295 EIF4EP4-201ENST00000424916 578 ntBASIC3.11□□□□□ -1.91
SRGAP3O43295 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.11□□□□□ -1.91
SRGAP3O43295 SNORA31.1-201ENST00000515993 133 ntBASIC3.11□□□□□ -1.91
SRGAP3O43295 SNORA31.5-201ENST00000516190 133 ntBASIC3.11□□□□□ -1.91
SRGAP3O43295 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.11□□□□□ -1.91
SRGAP3O43295 MIR5092-201ENST00000583139 88 ntBASIC3.11□□□□□ -1.91
SRGAP3O43295 RPL17P51-201ENST00000605218 238 ntBASIC3.11□□□□□ -1.91
SRGAP3O43295 AL391903.3-201ENST00000612158 163 ntBASIC3.11□□□□□ -1.91
SRGAP3O43295 U4.3-201ENST00000621047 82 ntBASIC3.11□□□□□ -1.91
SRGAP3O43295 AC068647.2-201ENST00000637380 353 ntBASIC3.11□□□□□ -1.91
SRGAP3O43295 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.1□□□□□ -1.91
SRGAP3O43295 RNU1-105P-201ENST00000363470 161 ntBASIC3.1□□□□□ -1.91
SRGAP3O43295 Y_RNA.229-201ENST00000364347 113 ntBASIC3.1□□□□□ -1.91
SRGAP3O43295 SNORD32B-201ENST00000364460 84 ntBASIC3.1□□□□□ -1.91
SRGAP3O43295 RNU6-407P-201ENST00000365280 104 ntBASIC3.1□□□□□ -1.91
SRGAP3O43295 MIR1185-2-201ENST00000408687 86 ntBASIC3.1□□□□□ -1.91
SRGAP3O43295 RNU6-383P-201ENST00000410864 94 ntBASIC3.1□□□□□ -1.91
SRGAP3O43295 MTND4LP9-201ENST00000427694 174 ntBASIC3.1□□□□□ -1.91
SRGAP3O43295 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.1□□□□□ -1.91
SRGAP3O43295 AC074290.1-201ENST00000448883 135 ntBASIC3.1□□□□□ -1.91
SRGAP3O43295 AC117454.1-201ENST00000491120 168 ntBASIC3.1□□□□□ -1.91
SRGAP3O43295 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.1□□□□□ -1.91
SRGAP3O43295 AC103810.1-201ENST00000579873 453 ntBASIC3.1□□□□□ -1.91
SRGAP3O43295 MIR4765-201ENST00000585007 77 ntBASIC3.1□□□□□ -1.91
SRGAP3O43295 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SRGAP3O43295 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SRGAP3O43295 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SRGAP3O43295 AC007256.1-201ENST00000392253 2765 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.09□□□□□ -1.91
SRGAP3O43295 Y_RNA.261-201ENST00000364631 102 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 RNU6-643P-201ENST00000384018 107 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 Y_RNA.420-201ENST00000384043 110 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 Y_RNA.500-201ENST00000384466 111 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 MIR29B2-201ENST00000385055 81 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 AL139095.1-201ENST00000404326 391 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 AL606845.1-201ENST00000404881 255 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 RNU6-1077P-201ENST00000410506 102 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 RNU6-1211P-201ENST00000459179 105 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 RNU7-14P-201ENST00000459331 62 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 AC004486.1-201ENST00000546846 233 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 AC112693.2-201ENST00000556538 232 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 MIR548AY-201ENST00000617669 107 ntBASIC3.09□□□□□ -1.91
SRGAP3O43295 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SRGAP3O43295 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
SRGAP3O43295 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.92
SRGAP3O43295 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.08□□□□□ -1.92
SRGAP3O43295 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SRGAP3O43295 MIR449A-201ENST00000362113 91 ntBASIC3.08□□□□□ -1.92
SRGAP3O43295 RNA5SP456-201ENST00000364002 114 ntBASIC3.08□□□□□ -1.92
SRGAP3O43295 U8.7-201ENST00000364940 136 ntBASIC3.08□□□□□ -1.92
SRGAP3O43295 SNORD14D-201ENST00000384390 87 ntBASIC3.08□□□□□ -1.92
SRGAP3O43295 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SRGAP3O43295 RNA5SP354-201ENST00000391247 136 ntBASIC3.08□□□□□ -1.92
SRGAP3O43295 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.08□□□□□ -1.92
SRGAP3O43295 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.08□□□□□ -1.92
SRGAP3O43295 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.08□□□□□ -1.92
SRGAP3O43295 MIR3670-2-201ENST00000582974 65 ntBASIC3.08□□□□□ -1.92
SRGAP3O43295 MIR3670-1-201ENST00000584160 65 ntBASIC3.08□□□□□ -1.92
SRGAP3O43295 MIR3670-3-201ENST00000584855 65 ntBASIC3.08□□□□□ -1.92
SRGAP3O43295 MIR4753-201ENST00000585119 83 ntBASIC3.08□□□□□ -1.92
SRGAP3O43295 MIR3670-4-201ENST00000612260 65 ntBASIC3.08□□□□□ -1.92
SRGAP3O43295 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.08□□□□□ -1.92
SRGAP3O43295 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.08□□□□□ -1.92
SRGAP3O43295 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SRGAP3O43295 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SRGAP3O43295 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SRGAP3O43295 Y_RNA.218-201ENST00000364218 104 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 RNU6-144P-201ENST00000383951 107 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 SNORD116-13-201ENST00000384408 92 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 MIR873-201ENST00000401120 77 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 AL355796.1-201ENST00000406706 323 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 MIR1283-1-201ENST00000408494 87 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 Y_RNA.629-201ENST00000411368 105 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 AL121890.1-201ENST00000435457 205 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.07□□□□□ -1.92
SRGAP3O43295 RPL23AP7-203ENST00000449021 469 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 RNU7-57P-201ENST00000459540 60 ntBASIC3.07□□□□□ -1.92
SRGAP3O43295 RPS27P26-201ENST00000494583 239 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms