Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
MSH5O43196 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.35□□□□□ -1.39
MSH5O43196 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
MSH5O43196 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
MSH5O43196 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
MSH5O43196 RNA5SP28-201ENST00000363841 119 ntBASIC6.34□□□□□ -1.39
MSH5O43196 AL359837.1-201ENST00000381357 287 ntBASIC6.34□□□□□ -1.39
MSH5O43196 SNORA37-201ENST00000384504 129 ntBASIC6.34□□□□□ -1.39
MSH5O43196 AC109327.1-201ENST00000471666 403 ntBASIC6.34□□□□□ -1.39
MSH5O43196 AC097510.1-201ENST00000510945 133 ntBASIC6.34□□□□□ -1.39
MSH5O43196 MIR3939-201ENST00000582614 106 ntBASIC6.34□□□□□ -1.39
MSH5O43196 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
MSH5O43196 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC6.34□□□□□ -1.39
MSH5O43196 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
MSH5O43196 DHX9P1-201ENST00000436565 3076 ntBASIC6.34□□□□□ -1.4
MSH5O43196 Z83843.1-201ENST00000604070 3685 ntBASIC6.34□□□□□ -1.4
MSH5O43196 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
MSH5O43196 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.33□□□□□ -1.4
MSH5O43196 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MSH5O43196 RNU1-33P-201ENST00000364249 162 ntBASIC6.33□□□□□ -1.4
MSH5O43196 RN7SKP153-201ENST00000365026 316 ntBASIC6.33□□□□□ -1.4
MSH5O43196 MIR545-201ENST00000385085 106 ntBASIC6.33□□□□□ -1.4
MSH5O43196 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC6.33□□□□□ -1.4
MSH5O43196 AL591623.2-201ENST00000449978 222 ntBASIC6.33□□□□□ -1.4
MSH5O43196 RNU6-980P-201ENST00000516925 103 ntBASIC6.33□□□□□ -1.4
MSH5O43196 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC6.33□□□□□ -1.4
MSH5O43196 MIR8055-201ENST00000610739 97 ntBASIC6.33□□□□□ -1.4
MSH5O43196 MIR6716-201ENST00000613413 80 ntBASIC6.33□□□□□ -1.4
MSH5O43196 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MSH5O43196 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC6.33□□□□□ -1.4
MSH5O43196 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MSH5O43196 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MSH5O43196 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MSH5O43196 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
MSH5O43196 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MSH5O43196 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC6.32□□□□□ -1.4
MSH5O43196 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC6.32□□□□□ -1.4
MSH5O43196 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
MSH5O43196 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.32□□□□□ -1.4
MSH5O43196 RNU6-654P-201ENST00000364373 107 ntBASIC6.32□□□□□ -1.4
MSH5O43196 RNA5SP72-201ENST00000364442 117 ntBASIC6.32□□□□□ -1.4
MSH5O43196 AC007224.1-201ENST00000564410 144 ntBASIC6.32□□□□□ -1.4
MSH5O43196 U4.6-201ENST00000621618 127 ntBASIC6.32□□□□□ -1.4
MSH5O43196 AC027279.3-201ENST00000625055 122 ntBASIC6.32□□□□□ -1.4
MSH5O43196 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.32□□□□□ -1.4
MSH5O43196 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.32□□□□□ -1.4
MSH5O43196 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
MSH5O43196 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
MSH5O43196 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MSH5O43196 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
MSH5O43196 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
MSH5O43196 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
MSH5O43196 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
MSH5O43196 SNORA70F-201ENST00000384142 135 ntBASIC6.31□□□□□ -1.4
MSH5O43196 MIR516B2-201ENST00000385190 85 ntBASIC6.31□□□□□ -1.4
MSH5O43196 AC093850.1-201ENST00000454121 251 ntBASIC6.31□□□□□ -1.4
MSH5O43196 PHBP14-201ENST00000512887 367 ntBASIC6.31□□□□□ -1.4
MSH5O43196 RNU6-586P-201ENST00000517265 104 ntBASIC6.31□□□□□ -1.4
MSH5O43196 RNU2-19P-201ENST00000517288 84 ntBASIC6.31□□□□□ -1.4
MSH5O43196 5S_rRNA.16-201ENST00000612928 119 ntBASIC6.31□□□□□ -1.4
MSH5O43196 AC019206.1-201ENST00000621938 425 ntBASIC6.31□□□□□ -1.4
MSH5O43196 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC6.31□□□□□ -1.4
MSH5O43196 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.31□□□□□ -1.4
MSH5O43196 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MSH5O43196 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MSH5O43196 CPHL1P-201ENST00000461341 3407 ntBASIC6.3□□□□□ -1.4
MSH5O43196 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MSH5O43196 MAPK10-253ENST00000641010 4072 ntBASIC6.3□□□□□ -1.4
MSH5O43196 MIRLET7C-201ENST00000362160 84 ntBASIC6.3□□□□□ -1.4
MSH5O43196 MIR134-201ENST00000385258 73 ntBASIC6.3□□□□□ -1.4
MSH5O43196 SNORA59A-201ENST00000459326 152 ntBASIC6.3□□□□□ -1.4
MSH5O43196 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC6.3□□□□□ -1.4
MSH5O43196 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MSH5O43196 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MSH5O43196 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
MSH5O43196 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
MSH5O43196 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MSH5O43196 RNU1-83P-201ENST00000363426 164 ntBASIC6.29□□□□□ -1.4
MSH5O43196 SNORA2.3-201ENST00000383920 135 ntBASIC6.29□□□□□ -1.4
MSH5O43196 MIR129-1-201ENST00000384972 72 ntBASIC6.29□□□□□ -1.4
MSH5O43196 SNORA77-201ENST00000408716 125 ntBASIC6.29□□□□□ -1.4
MSH5O43196 AC245047.3-201ENST00000429428 127 ntBASIC6.29□□□□□ -1.4
MSH5O43196 AC016831.4-201ENST00000438302 307 ntBASIC6.29□□□□□ -1.4
MSH5O43196 STAG3L5P-204ENST00000443759 179 ntBASIC6.29□□□□□ -1.4
MSH5O43196 AC245517.4-201ENST00000448601 281 ntBASIC6.29□□□□□ -1.4
MSH5O43196 EIF4BP1-201ENST00000554881 351 ntBASIC6.29□□□□□ -1.4
MSH5O43196 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC6.29□□□□□ -1.4
MSH5O43196 FAM27B-201ENST00000610601 213 ntBASIC6.29□□□□□ -1.4
MSH5O43196 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
MSH5O43196 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
MSH5O43196 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
MSH5O43196 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MSH5O43196 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
MSH5O43196 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.28□□□□□ -1.4
MSH5O43196 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
MSH5O43196 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
MSH5O43196 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MSH5O43196 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MSH5O43196 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC6.28□□□□□ -1.4
MSH5O43196 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms