Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 AL353689.1-201ENST00000438895 199 ntBASIC2.91□□□□□ -1.94
SHOXO15266 RN7SL542P-201ENST00000467147 294 ntBASIC2.91□□□□□ -1.94
SHOXO15266 AC106707.2-201ENST00000484182 374 ntBASIC2.91□□□□□ -1.94
SHOXO15266 AC011406.1-201ENST00000512440 370 ntBASIC2.91□□□□□ -1.94
SHOXO15266 AC091826.1-201ENST00000514065 313 ntBASIC2.91□□□□□ -1.94
SHOXO15266 RNU6-197P-201ENST00000516680 100 ntBASIC2.91□□□□□ -1.94
SHOXO15266 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.91□□□□□ -1.94
SHOXO15266 AL929325.1-201ENST00000603096 117 ntBASIC2.91□□□□□ -1.94
SHOXO15266 JPX_2.1-201ENST00000614161 69 ntBASIC2.91□□□□□ -1.94
SHOXO15266 AP003355.3-201ENST00000623465 114 ntBASIC2.91□□□□□ -1.94
SHOXO15266 AC012640.5-201ENST00000623897 319 ntBASIC2.91□□□□□ -1.94
SHOXO15266 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.91□□□□□ -1.94
SHOXO15266 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHOXO15266 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.91□□□□□ -1.94
SHOXO15266 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.9□□□□□ -1.94
SHOXO15266 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SHOXO15266 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.9□□□□□ -1.95
SHOXO15266 RNU6-818P-201ENST00000364837 108 ntBASIC2.9□□□□□ -1.95
SHOXO15266 MIR562-201ENST00000384894 95 ntBASIC2.9□□□□□ -1.95
SHOXO15266 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
SHOXO15266 AC008267.6-201ENST00000441664 139 ntBASIC2.9□□□□□ -1.95
SHOXO15266 AC009238.1-201ENST00000442165 424 ntBASIC2.9□□□□□ -1.95
SHOXO15266 AC009237.6-201ENST00000446969 424 ntBASIC2.9□□□□□ -1.95
SHOXO15266 RNU6-579P-201ENST00000516879 102 ntBASIC2.9□□□□□ -1.95
SHOXO15266 MIR378D2-201ENST00000580636 98 ntBASIC2.9□□□□□ -1.95
SHOXO15266 AL049861.1-201ENST00000603130 150 ntBASIC2.9□□□□□ -1.95
SHOXO15266 AL353149.1-201ENST00000610667 244 ntBASIC2.9□□□□□ -1.95
SHOXO15266 AL359075.3-201ENST00000613288 217 ntBASIC2.9□□□□□ -1.95
SHOXO15266 TUG1_4.1-201ENST00000619464 181 ntBASIC2.9□□□□□ -1.95
SHOXO15266 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.9□□□□□ -1.95
SHOXO15266 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHOXO15266 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.9□□□□□ -1.95
SHOXO15266 RNA5SP125-201ENST00000364843 120 ntBASIC2.89□□□□□ -1.95
SHOXO15266 RNU6-597P-201ENST00000365620 102 ntBASIC2.89□□□□□ -1.95
SHOXO15266 RNU6-160P-201ENST00000384591 107 ntBASIC2.89□□□□□ -1.95
SHOXO15266 RNU6-768P-201ENST00000384683 107 ntBASIC2.89□□□□□ -1.95
SHOXO15266 MIR515-2-201ENST00000384883 83 ntBASIC2.89□□□□□ -1.95
SHOXO15266 MIR515-1-201ENST00000384884 83 ntBASIC2.89□□□□□ -1.95
SHOXO15266 RNU6-1154P-201ENST00000391001 104 ntBASIC2.89□□□□□ -1.95
SHOXO15266 CYCSP19-201ENST00000411715 316 ntBASIC2.89□□□□□ -1.95
SHOXO15266 EDDM3CP-201ENST00000415977 425 ntBASIC2.89□□□□□ -1.95
SHOXO15266 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.89□□□□□ -1.95
SHOXO15266 AC245102.2-201ENST00000448956 180 ntBASIC2.89□□□□□ -1.95
SHOXO15266 RNU1-131P-201ENST00000458943 161 ntBASIC2.89□□□□□ -1.95
SHOXO15266 RNA5SP217-201ENST00000515959 91 ntBASIC2.89□□□□□ -1.95
SHOXO15266 RNU7-99P-201ENST00000516271 62 ntBASIC2.89□□□□□ -1.95
SHOXO15266 RNU6-1096P-201ENST00000517089 102 ntBASIC2.89□□□□□ -1.95
SHOXO15266 AC026333.2-201ENST00000542164 106 ntBASIC2.89□□□□□ -1.95
SHOXO15266 RPL23AP91-201ENST00000569211 455 ntBASIC2.89□□□□□ -1.95
SHOXO15266 AC073413.2-201ENST00000604332 360 ntBASIC2.89□□□□□ -1.95
SHOXO15266 AC100821.1-201ENST00000523153 2479 ntBASIC2.88□□□□□ -1.95
SHOXO15266 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
SHOXO15266 RNU1-96P-201ENST00000364163 162 ntBASIC2.88□□□□□ -1.95
SHOXO15266 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SHOXO15266 Y_RNA.420-201ENST00000384043 110 ntBASIC2.88□□□□□ -1.95
SHOXO15266 MIR627-201ENST00000384979 97 ntBASIC2.88□□□□□ -1.95
SHOXO15266 RNU6-1186P-201ENST00000410429 97 ntBASIC2.88□□□□□ -1.95
SHOXO15266 RN7SKP220-201ENST00000410611 288 ntBASIC2.88□□□□□ -1.95
SHOXO15266 AC245047.4-201ENST00000433189 144 ntBASIC2.88□□□□□ -1.95
SHOXO15266 AC018634.1-201ENST00000437554 401 ntBASIC2.88□□□□□ -1.95
SHOXO15266 AL445687.1-201ENST00000439946 251 ntBASIC2.88□□□□□ -1.95
SHOXO15266 SNRPGP8-201ENST00000454064 226 ntBASIC2.88□□□□□ -1.95
SHOXO15266 AC018868.1-201ENST00000491307 315 ntBASIC2.88□□□□□ -1.95
SHOXO15266 RN7SL636P-201ENST00000497504 294 ntBASIC2.88□□□□□ -1.95
SHOXO15266 RNA5SP153-201ENST00000516498 76 ntBASIC2.88□□□□□ -1.95
SHOXO15266 SCARNA20.6-201ENST00000517251 106 ntBASIC2.88□□□□□ -1.95
SHOXO15266 AC090142.3-201ENST00000519012 385 ntBASIC2.88□□□□□ -1.95
SHOXO15266 MIR4662B-201ENST00000579498 81 ntBASIC2.88□□□□□ -1.95
SHOXO15266 MIR4444-1-201ENST00000581696 74 ntBASIC2.88□□□□□ -1.95
SHOXO15266 MIR4444-2-201ENST00000584390 74 ntBASIC2.88□□□□□ -1.95
SHOXO15266 AL031274.2-201ENST00000599419 203 ntBASIC2.88□□□□□ -1.95
SHOXO15266 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.88□□□□□ -1.95
SHOXO15266 uc_338.4-201ENST00000616635 176 ntBASIC2.88□□□□□ -1.95
SHOXO15266 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHOXO15266 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHOXO15266 MIR340-201ENST00000362125 95 ntBASIC2.87□□□□□ -1.95
SHOXO15266 Y_RNA.111-201ENST00000363248 100 ntBASIC2.87□□□□□ -1.95
SHOXO15266 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHOXO15266 SNORA46-201ENST00000384762 135 ntBASIC2.87□□□□□ -1.95
SHOXO15266 RNU2-70P-201ENST00000410718 179 ntBASIC2.87□□□□□ -1.95
SHOXO15266 Y_RNA.621-201ENST00000411065 96 ntBASIC2.87□□□□□ -1.95
SHOXO15266 MTND4LP9-201ENST00000427694 174 ntBASIC2.87□□□□□ -1.95
SHOXO15266 UQCRHP3-201ENST00000451503 251 ntBASIC2.87□□□□□ -1.95
SHOXO15266 SNORD77.4-201ENST00000516158 81 ntBASIC2.87□□□□□ -1.95
SHOXO15266 SNORA70.24-201ENST00000517233 118 ntBASIC2.87□□□□□ -1.95
SHOXO15266 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SHOXO15266 Z83843.1-201ENST00000604070 3685 ntBASIC2.87□□□□□ -1.95
SHOXO15266 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SHOXO15266 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHOXO15266 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHOXO15266 SNORA25.7-201ENST00000364375 127 ntBASIC2.86□□□□□ -1.95
SHOXO15266 RPL32P35-201ENST00000415214 394 ntBASIC2.86□□□□□ -1.95
SHOXO15266 ATP5J2P3-201ENST00000451550 258 ntBASIC2.86□□□□□ -1.95
SHOXO15266 RN7SL594P-201ENST00000470590 287 ntBASIC2.86□□□□□ -1.95
SHOXO15266 RNA5SP272-201ENST00000516095 111 ntBASIC2.86□□□□□ -1.95
SHOXO15266 RNU1-142P-201ENST00000516682 145 ntBASIC2.86□□□□□ -1.95
SHOXO15266 SNORA70.19-201ENST00000516717 90 ntBASIC2.86□□□□□ -1.95
SHOXO15266 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.86□□□□□ -1.95
SHOXO15266 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHOXO15266 AC018630.2-201ENST00000534866 2403 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms