Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC188H7C350 SNORA77B-201ENST00000578179 125 ntBASIC1.52□□□□□ -2.17
CCDC188H7C350 MIR3684-201ENST00000579779 74 ntBASIC1.52□□□□□ -2.17
CCDC188H7C350 MIR3683-201ENST00000580847 82 ntBASIC1.52□□□□□ -2.17
CCDC188H7C350 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CCDC188H7C350 AL355073.2-201ENST00000612106 557 ntBASIC1.52□□□□□ -2.17
CCDC188H7C350 MIR7111-201ENST00000619751 72 ntBASIC1.52□□□□□ -2.17
CCDC188H7C350 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC188H7C350 MIR1302-1-201ENST00000637932 143 ntBASIC1.52□□□□□ -2.17
CCDC188H7C350 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC188H7C350 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.52□□□□□ -2.17
CCDC188H7C350 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 Y_RNA.142-201ENST00000363491 102 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 Y_RNA.314-201ENST00000365114 102 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 RNU6-926P-201ENST00000384075 107 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 RNU6-376P-201ENST00000384731 106 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 MRPL42P3-201ENST00000401492 326 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC188H7C350 AL606517.2-201ENST00000442855 241 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC188H7C350 RNA5SP445-201ENST00000515889 115 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 RNA5SP61-201ENST00000516453 100 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 RNU7-172P-201ENST00000517125 64 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 AC144568.1-201ENST00000520139 137 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC188H7C350 AL121890.5-201ENST00000620848 304 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC188H7C350 MIR3674-201ENST00000636576 68 ntBASIC1.51□□□□□ -2.17
CCDC188H7C350 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
CCDC188H7C350 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC188H7C350 U8.1-201ENST00000362843 134 ntBASIC1.5□□□□□ -2.17
CCDC188H7C350 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC188H7C350 RAB28P5-201ENST00000427490 651 ntBASIC1.5□□□□□ -2.17
CCDC188H7C350 AL135790.2-201ENST00000437701 267 ntBASIC1.5□□□□□ -2.17
CCDC188H7C350 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.5□□□□□ -2.17
CCDC188H7C350 SNORA25.15-201ENST00000516487 89 ntBASIC1.5□□□□□ -2.17
CCDC188H7C350 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC188H7C350 AC022217.4-201ENST00000604389 163 ntBASIC1.5□□□□□ -2.17
CCDC188H7C350 RBM11P1-201ENST00000604951 799 ntBASIC1.5□□□□□ -2.17
CCDC188H7C350 AC080078.3-201ENST00000605407 463 ntBASIC1.5□□□□□ -2.17
CCDC188H7C350 AL021879.1-201ENST00000611756 288 ntBASIC1.5□□□□□ -2.17
CCDC188H7C350 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.5□□□□□ -2.17
CCDC188H7C350 MIR8054-201ENST00000620877 86 ntBASIC1.5□□□□□ -2.17
CCDC188H7C350 MIR378A-201ENST00000362177 66 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 RNY1P10-201ENST00000363268 113 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 SNORA72.1-201ENST00000363485 129 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 SNORD1A-201ENST00000364968 72 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 Y_RNA.387-201ENST00000383918 102 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 SNORA20B-201ENST00000384220 132 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 RNU1-78P-201ENST00000391248 165 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 AL034345.1-201ENST00000407768 123 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 ELOCP21-201ENST00000412558 336 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 AC004965.1-201ENST00000413033 213 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 AC018865.2-201ENST00000423631 129 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 MTND4P28-201ENST00000426217 387 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 AC093019.1-201ENST00000443135 252 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 AC097462.1-201ENST00000514125 324 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 RNU2-56P-201ENST00000516826 190 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 UBE2V2P2-201ENST00000587677 504 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 AC025253.1-201ENST00000613623 543 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 U6.108-201ENST00000637764 58 ntBASIC1.49□□□□□ -2.17
CCDC188H7C350 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CCDC188H7C350 RNU6-1123P-201ENST00000362347 106 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 RNU6-1301P-201ENST00000362724 104 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 Y_RNA.796-201ENST00000364268 102 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 Y_RNA.799-201ENST00000364992 102 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 RNA5SP190-201ENST00000365222 118 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 Y_RNA.390-201ENST00000383932 102 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 RNU6-1310P-201ENST00000384153 107 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 RNU6-318P-201ENST00000384283 103 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 RNU6-440P-201ENST00000390882 105 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 STAG3L5P-204ENST00000443759 179 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 RPS27P1-201ENST00000450552 247 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC188H7C350 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC188H7C350 RNA5SP20-201ENST00000515976 84 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 RNU6-1278P-201ENST00000516130 107 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 SUB1P3-201ENST00000564581 315 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 AC021506.2-201ENST00000612354 169 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 MTND4LP32-201ENST00000636111 270 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CCDC188H7C350 AC018630.2-201ENST00000534866 2403 ntBASIC1.48□□□□□ -2.17
CCDC188H7C350 Y_RNA.265-201ENST00000364677 108 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 Y_RNA.267-201ENST00000364679 109 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 RNU6-1031P-201ENST00000384773 107 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 SNORA67.5-201ENST00000391036 107 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 Y_RNA.592-201ENST00000410274 109 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 RNU6-321P-201ENST00000410912 106 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 MTCO3P19-201ENST00000415864 321 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC188H7C350 SNX2P2-201ENST00000424553 323 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC188H7C350 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 AC245517.4-201ENST00000448601 281 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 MTCO3P10-201ENST00000455912 772 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 SNORD13-201ENST00000459299 104 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 RNU6-408P-201ENST00000515910 100 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 RNU6-470P-201ENST00000515954 104 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms