Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SNORD116.3-201ENST00000517176 78 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 MIR5094-201ENST00000578766 85 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 MIR4753-201ENST00000585119 83 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 AC104695.3-201ENST00000604052 296 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 SNRPGP20-201ENST00000604477 205 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 AC040896.1-201ENST00000613819 479 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.112-201ENST00000363250 102 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-245P-201ENST00000384020 107 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 Y_RNA.428-201ENST00000384078 102 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 Y_RNA.460-201ENST00000384255 102 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-160P-201ENST00000384591 107 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-417P-201ENST00000384712 107 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 AL355796.1-201ENST00000406706 323 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 RAB28P5-201ENST00000427490 651 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 AC245047.4-201ENST00000433189 144 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 AC007395.1-201ENST00000451333 677 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 AC010409.1-201ENST00000487382 476 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 AC011406.1-201ENST00000512440 370 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-307P-201ENST00000516743 106 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 AC018448.1-201ENST00000552843 316 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 AL442163.3-201ENST00000554110 156 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 AC130454.1-201ENST00000622948 401 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 AL606534.2-204ENST00000635008 178 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 U6.108-201ENST00000637764 58 ntBASIC1.33□□□□□ -2.2
TRIM49D1C9J1S8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 MIR126-201ENST00000362291 85 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 Y_RNA.172-201ENST00000363765 102 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-806P-201ENST00000365147 105 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 SNORA4.2-201ENST00000365313 147 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 Y_RNA.527-201ENST00000384573 102 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 MIR548P-201ENST00000408336 84 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 AC009310.1-201ENST00000414414 451 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 AC113618.1-201ENST00000416747 285 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 RPS29P29-201ENST00000456396 171 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-625P-201ENST00000459412 107 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-976P-201ENST00000516086 111 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-1046P-201ENST00000516538 107 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-1012P-201ENST00000516606 109 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 RN7SKP49-201ENST00000516675 260 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 RNU7-128P-201ENST00000517247 62 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 RNA5SP437-201ENST00000517249 129 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 AC025647.1-201ENST00000517879 253 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 AC023157.2-201ENST00000540596 141 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 MIR4659A-201ENST00000580269 81 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 AC133104.2-201ENST00000615272 193 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.32□□□□□ -2.2
TRIM49D1C9J1S8 MIR1185-2-201ENST00000408687 86 ntBASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 AC112492.4-201ENST00000456549 352 ntBASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 Y_RNA.631-201ENST00000459607 101 ntBASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-1170P-201ENST00000515974 106 ntBASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 SNORA44.1-201ENST00000517031 108 ntBASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 AC044792.1-201ENST00000593294 196 ntBASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 RAC1P9-201ENST00000604990 392 ntBASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 snoZ196.1-201ENST00000625269 89 ntBASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 MIR338-201ENST00000636369 67 ntBASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRIM49D1C9J1S8 MIR378A-201ENST00000362177 66 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-280P-201ENST00000364145 104 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 Y_RNA.286-201ENST00000364813 102 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-102P-201ENST00000384485 104 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-1235P-201ENST00000384559 107 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 MIR628-201ENST00000385229 95 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 SNORA12.1-201ENST00000390873 148 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RNU4-30P-201ENST00000410245 143 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RNA5SP100-201ENST00000410903 110 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RNA5SP59-201ENST00000410922 110 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-1199P-201ENST00000411249 104 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 BTF3P4-201ENST00000418852 495 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 AC099799.1-201ENST00000439809 192 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RPEP5-201ENST00000441137 268 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 ATP5J2P3-201ENST00000451550 258 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RNU1-123P-201ENST00000458950 160 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-498P-201ENST00000459468 107 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-221P-201ENST00000459541 99 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 AL163540.1-201ENST00000485382 386 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 AC067942.3-201ENST00000512025 362 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-63P-201ENST00000516690 95 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 SNORA31.17-201ENST00000516953 127 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 RNU7-4P-201ENST00000516961 62 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 AC040926.1-201ENST00000530195 238 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 AP003072.1-201ENST00000531740 145 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 AC136932.1-201ENST00000574771 208 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 MIR4680-201ENST00000580906 66 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 AL356055.1-201ENST00000602528 446 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 222.7 ms