Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC090821.2-201ENST00000523552 176 ntBASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 HSPE1P19-201ENST00000603327 295 ntBASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 MIR1244-1-201ENST00000612829 85 ntBASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 MIR1244-3-201ENST00000635744 85 ntBASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 MIR1244-2-201ENST00000636449 85 ntBASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 MIR1244-4-202ENST00000636813 85 ntBASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 RNU6-510P-201ENST00000391239 108 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 UBE2V1P7-201ENST00000446395 340 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 MTND3P10-201ENST00000450967 341 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 RPS29P29-201ENST00000456396 171 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 SNORA40.9-201ENST00000515895 93 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 SNORD79.1-201ENST00000516069 84 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 Y_RNA.708-201ENST00000516950 96 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 RNU6-1096P-201ENST00000517089 102 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 AC136932.1-201ENST00000574771 208 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 FAM106DP-201ENST00000586416 501 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 AL050343.2-201ENST00000607338 280 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 AC093783.1-201ENST00000612976 329 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 MIR3674-201ENST00000636576 68 ntBASIC1.31□□□□□ -2.2
HMGB1P1B2RPK0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 RNU4-41P-201ENST00000364426 143 ntBASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 MIR562-201ENST00000384894 95 ntBASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 RNA5SP482-201ENST00000391269 118 ntBASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 MIR548K-201ENST00000408406 116 ntBASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 AC074133.1-201ENST00000515696 183 ntBASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 ACA64.5-201ENST00000516207 127 ntBASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 SCARNA16.2-201ENST00000516520 172 ntBASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 AC015720.1-201ENST00000565251 277 ntBASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 MIR3683-201ENST00000580847 82 ntBASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
HMGB1P1B2RPK0 AC008163.1-202ENST00000636004 2889 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 MIRLET7C-201ENST00000362160 84 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 RNU6-60P-201ENST00000364792 103 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 Y_RNA.404-201ENST00000383978 102 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 RNU6-318P-201ENST00000384283 103 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 U8.13-201ENST00000390842 128 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 MIR873-201ENST00000401120 77 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 RNA5SP508-201ENST00000411327 119 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 Z98949.2-201ENST00000440996 144 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 AC107399.1-201ENST00000451226 265 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 MIR3684-201ENST00000579779 74 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 MIR4435-1-201ENST00000582552 80 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 MIR6845-201ENST00000613182 61 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 AC012676.2-201ENST00000619258 186 ntBASIC1.29□□□□□ -2.2
HMGB1P1B2RPK0 SNORA22-201ENST00000383907 134 ntBASIC1.28□□□□□ -2.2
HMGB1P1B2RPK0 SNORA22C-201ENST00000384614 134 ntBASIC1.28□□□□□ -2.2
HMGB1P1B2RPK0 Y_RNA.621-201ENST00000411065 96 ntBASIC1.28□□□□□ -2.2
HMGB1P1B2RPK0 RPL23AP36-201ENST00000413895 458 ntBASIC1.28□□□□□ -2.2
HMGB1P1B2RPK0 PIGPP3-201ENST00000425307 415 ntBASIC1.28□□□□□ -2.2
HMGB1P1B2RPK0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGB1P1B2RPK0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.28□□□□□ -2.2
HMGB1P1B2RPK0 AL357312.1-201ENST00000603879 298 ntBASIC1.28□□□□□ -2.2
HMGB1P1B2RPK0 PISRT1.1-201ENST00000616930 107 ntBASIC1.28□□□□□ -2.2
HMGB1P1B2RPK0 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.28□□□□□ -2.2
HMGB1P1B2RPK0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HMGB1P1B2RPK0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.27□□□□□ -2.21
HMGB1P1B2RPK0 MIR19B1-201ENST00000384829 87 ntBASIC1.27□□□□□ -2.21
HMGB1P1B2RPK0 MIR526A1-201ENST00000384897 85 ntBASIC1.27□□□□□ -2.21
HMGB1P1B2RPK0 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
HMGB1P1B2RPK0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.27□□□□□ -2.21
HMGB1P1B2RPK0 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
HMGB1P1B2RPK0 AC068790.6-201ENST00000602558 258 ntBASIC1.27□□□□□ -2.21
HMGB1P1B2RPK0 AL020996.3-201ENST00000606617 222 ntBASIC1.27□□□□□ -2.21
HMGB1P1B2RPK0 AC005858.4-201ENST00000623191 700 ntBASIC1.27□□□□□ -2.21
HMGB1P1B2RPK0 MIR449A-201ENST00000362113 91 ntBASIC1.26□□□□□ -2.21
HMGB1P1B2RPK0 SNORD114-1-201ENST00000362705 72 ntBASIC1.26□□□□□ -2.21
HMGB1P1B2RPK0 SNORD68-201ENST00000363214 84 ntBASIC1.26□□□□□ -2.21
HMGB1P1B2RPK0 SNORD116-4-201ENST00000384733 96 ntBASIC1.26□□□□□ -2.21
HMGB1P1B2RPK0 SNORD12B-201ENST00000410433 91 ntBASIC1.26□□□□□ -2.21
HMGB1P1B2RPK0 MTND3P8-201ENST00000412909 339 ntBASIC1.26□□□□□ -2.21
HMGB1P1B2RPK0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.26□□□□□ -2.21
HMGB1P1B2RPK0 LINC01399-202ENST00000458450 244 ntBASIC1.26□□□□□ -2.21
HMGB1P1B2RPK0 RNU6-1213P-201ENST00000517075 94 ntBASIC1.26□□□□□ -2.21
HMGB1P1B2RPK0 BNIP3P10-201ENST00000605360 577 ntBASIC1.26□□□□□ -2.21
HMGB1P1B2RPK0 SCARNA4.1-201ENST00000628597 123 ntBASIC1.26□□□□□ -2.21
HMGB1P1B2RPK0 RNU6-117P-201ENST00000365415 107 ntBASIC1.25□□□□□ -2.21
HMGB1P1B2RPK0 RNU6-163P-201ENST00000384396 106 ntBASIC1.25□□□□□ -2.21
HMGB1P1B2RPK0 SNORA80D-201ENST00000384488 135 ntBASIC1.25□□□□□ -2.21
HMGB1P1B2RPK0 MIR1277-201ENST00000408536 78 ntBASIC1.25□□□□□ -2.21
HMGB1P1B2RPK0 RNU5A-5P-201ENST00000411054 116 ntBASIC1.25□□□□□ -2.21
HMGB1P1B2RPK0 AC114482.1-201ENST00000418010 247 ntBASIC1.25□□□□□ -2.21
HMGB1P1B2RPK0 AC069439.1-201ENST00000494739 167 ntBASIC1.25□□□□□ -2.21
HMGB1P1B2RPK0 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
HMGB1P1B2RPK0 AL096861.1-201ENST00000610899 123 ntBASIC1.25□□□□□ -2.21
HMGB1P1B2RPK0 AC092794.2-201ENST00000620933 563 ntBASIC1.25□□□□□ -2.21
HMGB1P1B2RPK0 AL391516.1-201ENST00000554380 2449 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 RNU6-593P-201ENST00000364716 112 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 RNU6-1080P-201ENST00000383982 107 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 MIR520G-201ENST00000385064 90 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 MIR891A-201ENST00000401237 79 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 RNA5SP511-201ENST00000410487 115 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 RPEP5-201ENST00000441137 268 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 UBL5P3-201ENST00000475112 231 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 RPS26P48-201ENST00000491713 339 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 PDCD5P2-201ENST00000507570 312 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 RNU6-408P-201ENST00000515910 100 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms