Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC092185.1-201ENST00000491371 97 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC85CA6NKD9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.777-201ENST00000516982 102 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 RPL21P9-201ENST00000556149 474 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3□□□□□ -1.93
CCDC85CA6NKD9 MIR3145-201ENST00000580727 82 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 MIR4282-201ENST00000583613 67 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.771-201ENST00000598668 102 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 snoU13.31-201ENST00000607291 104 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3□□□□□ -1.93
CCDC85CA6NKD9 RMST_8.1-201ENST00000610287 165 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.789-201ENST00000622480 102 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC85CA6NKD9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC85CA6NKD9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 AC007336.1-201ENST00000576365 3828 ntBASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 RNU6-1318P-201ENST00000365389 103 ntBASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 RNU6-160P-201ENST00000384591 107 ntBASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 RNA5SP320-201ENST00000516263 124 ntBASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 RNA5SP480-201ENST00000516840 109 ntBASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 RNU6-388P-201ENST00000517012 105 ntBASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 RNU6-389P-201ENST00000517048 105 ntBASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 AL078604.3-201ENST00000615580 211 ntBASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 U4.3-201ENST00000621047 82 ntBASIC2.99□□□□□ -1.93
CCDC85CA6NKD9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 SNORA38-201ENST00000363946 132 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.257-201ENST00000364596 102 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.368-201ENST00000365547 113 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 RNU1-109P-201ENST00000383960 147 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 MIR29C-201ENST00000385231 88 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 SNORD2.1-201ENST00000458762 69 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 RPS27P29-201ENST00000463110 252 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 RPS26P55-201ENST00000471178 356 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 RNU4-71P-201ENST00000516258 113 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 MIR2276-201ENST00000516886 89 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 RNU6-111P-201ENST00000517179 105 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 AL512605.2-201ENST00000592972 256 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 AL162424.1-201ENST00000602325 221 ntBASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC85CA6NKD9 CENPCP1-201ENST00000533085 2578 ntBASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 MIR30E-201ENST00000362104 92 ntBASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 SNORD27-201ENST00000363981 72 ntBASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 RNU6-740P-201ENST00000364734 105 ntBASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.277-201ENST00000364754 102 ntBASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 SNORA80E-201ENST00000384744 137 ntBASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 RNU6-321P-201ENST00000410912 106 ntBASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 AC060773.1-201ENST00000421698 310 ntBASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 AC108667.1-201ENST00000428618 249 ntBASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 MIR4643-201ENST00000577473 78 ntBASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 MIR4658-201ENST00000584344 65 ntBASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC85CA6NKD9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.224-201ENST00000364308 111 ntBASIC2.96□□□□□ -1.94
CCDC85CA6NKD9 SNORD114-6-201ENST00000364393 72 ntBASIC2.96□□□□□ -1.94
CCDC85CA6NKD9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.96□□□□□ -1.94
CCDC85CA6NKD9 Y_RNA.456-201ENST00000384232 111 ntBASIC2.96□□□□□ -1.94
CCDC85CA6NKD9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC85CA6NKD9 AC009779.6-201ENST00000603972 165 ntBASIC2.96□□□□□ -1.94
CCDC85CA6NKD9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC85CA6NKD9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.96□□□□□ -1.94
CCDC85CA6NKD9 MIR6873-201ENST00000622788 63 ntBASIC2.96□□□□□ -1.94
CCDC85CA6NKD9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC85CA6NKD9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 RNU6-1272P-201ENST00000362776 107 ntBASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 Y_RNA.124-201ENST00000363339 93 ntBASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 RNA5SP274-201ENST00000410484 108 ntBASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 AL135790.2-201ENST00000437701 267 ntBASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 AC011406.1-201ENST00000512440 370 ntBASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 RNU6-1146P-201ENST00000516282 102 ntBASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 AC136628.3-201ENST00000521868 290 ntBASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 AC007536.1-201ENST00000533382 349 ntBASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 AC009127.3-201ENST00000570531 403 ntBASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 AC078938.1-201ENST00000620993 318 ntBASIC2.95□□□□□ -1.94
CCDC85CA6NKD9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CCDC85CA6NKD9 DYNLT3P1-201ENST00000378574 347 ntBASIC2.94□□□□□ -1.94
CCDC85CA6NKD9 RNU6-338P-201ENST00000383888 105 ntBASIC2.94□□□□□ -1.94
CCDC85CA6NKD9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.94□□□□□ -1.94
CCDC85CA6NKD9 AC010154.1-201ENST00000425857 269 ntBASIC2.94□□□□□ -1.94
CCDC85CA6NKD9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC85CA6NKD9 RNU6-295P-201ENST00000516901 104 ntBASIC2.94□□□□□ -1.94
CCDC85CA6NKD9 MIR3126-201ENST00000577443 74 ntBASIC2.94□□□□□ -1.94
CCDC85CA6NKD9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC85CA6NKD9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC85CA6NKD9 Y_RNA.54-201ENST00000362766 105 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms