Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 Y_RNA.445-201ENST00000384168 102 ntBASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 Y_RNA.535-201ENST00000384612 99 ntBASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 AL606517.2-201ENST00000442855 241 ntBASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 HMGN1P13-201ENST00000505795 138 ntBASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 RNU6-237P-201ENST00000515985 71 ntBASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 AC015712.3-201ENST00000559380 164 ntBASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 AC022432.1-201ENST00000595739 310 ntBASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 AC240442.1-201ENST00000616055 283 ntBASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 AL160413.1-201ENST00000622780 310 ntBASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 AC091925.1-201ENST00000623204 462 ntBASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 AL606534.2-204ENST00000635008 178 ntBASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 AC091812.1-201ENST00000432235 1948 ntBASIC1.52□□□□□ -2.17
NKX6-3A6NJ46 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 Y_RNA.27-201ENST00000362540 103 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 RNU6-797P-201ENST00000363101 109 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 RNU6-626P-201ENST00000363354 107 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 RNU6-20P-201ENST00000384106 107 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 Y_RNA.460-201ENST00000384255 102 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 EBAG9P1-201ENST00000418955 543 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 AC010154.1-201ENST00000425857 269 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 AC003989.2-201ENST00000440224 169 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 RPL26P26-201ENST00000480251 434 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 RPL36AP21-201ENST00000490372 323 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 AC010598.1-201ENST00000510378 103 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 RNU6-1012P-201ENST00000516606 109 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 RPS29P30-201ENST00000600975 111 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 AC010900.2-201ENST00000604508 210 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 AC103810.8-201ENST00000607347 118 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 U6.73-201ENST00000619194 103 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 U6.115-201ENST00000636045 103 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 U6.108-201ENST00000637764 58 ntBASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NKX6-3A6NJ46 Y_RNA.101-201ENST00000363154 102 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 Y_RNA.124-201ENST00000363339 93 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 Y_RNA.138-201ENST00000363462 102 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 RNU6-136P-201ENST00000384663 107 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 SNORA40.18-201ENST00000391200 128 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 MTCO3P19-201ENST00000415864 321 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 AC018865.2-201ENST00000423631 129 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 AL137792.2-201ENST00000443484 235 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 MRPS10P1-201ENST00000448483 130 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 HMGN2P23-201ENST00000456759 269 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 RNU7-34P-201ENST00000459394 64 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 AC108210.2-201ENST00000503681 201 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 AC005176.2-201ENST00000596933 147 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 AC073413.2-201ENST00000604332 360 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 AC084768.2-201ENST00000622736 221 ntBASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.5□□□□□ -2.17
NKX6-3A6NJ46 RNU6-414P-201ENST00000363705 104 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 RNU1-115P-201ENST00000365329 160 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 RNU6-1310P-201ENST00000384153 107 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 RNU6-474P-201ENST00000384243 107 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 MIR515-2-201ENST00000384883 83 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 MIR515-1-201ENST00000384884 83 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 MIR934-201ENST00000401241 83 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 AC005908.1-201ENST00000468701 347 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 RNA5SP20-201ENST00000515976 84 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 RNU6-911P-201ENST00000516523 104 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 RNU7-128P-201ENST00000517247 62 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 RN7SKP295-201ENST00000517264 153 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 MIR4419B-201ENST00000577260 68 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 AC024614.2-201ENST00000577584 372 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 MIR4769-201ENST00000584126 77 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 AC100821.1-201ENST00000523153 2479 ntBASIC1.49□□□□□ -2.17
NKX6-3A6NJ46 RNU6-324P-201ENST00000363957 106 ntBASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 SNORA63D-201ENST00000364359 132 ntBASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 SNORD42.2-201ENST00000365570 69 ntBASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 MIR9-3-201ENST00000385084 90 ntBASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 RPL21P1-201ENST00000399532 476 ntBASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 MCFD2P1-201ENST00000417812 300 ntBASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 CYCSP49-201ENST00000420810 319 ntBASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 MTCO2P12-201ENST00000427426 682 ntBASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 AC069257.2-201ENST00000441819 155 ntBASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 RNU6-966P-201ENST00000516479 104 ntBASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 RNU6-63P-201ENST00000516690 95 ntBASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 RNU7-172P-201ENST00000517125 64 ntBASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NKX6-3A6NJ46 MIR424-201ENST00000362227 98 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 SNORA27.1-201ENST00000362604 124 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 Y_RNA.112-201ENST00000363250 102 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 RNU6-450P-201ENST00000364654 107 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 COX6CP10-201ENST00000416832 224 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms