Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL117342.1-201ENST00000404861 406 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 MIR1289-2-201ENST00000408360 111 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 U3.40-201ENST00000408706 208 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 RPL23AP36-201ENST00000413895 458 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 MTCYBP9-201ENST00000431021 303 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 HMGN2P34-201ENST00000437647 269 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 HSPE1P25-201ENST00000455484 251 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 SEPT14P8-201ENST00000508026 178 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 SUMO2P18-201ENST00000518873 252 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 AP005660.1-201ENST00000522972 293 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 AC009127.3-201ENST00000570531 403 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 MIR5694-201ENST00000581190 76 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 AC006380.1-201ENST00000603598 186 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 SNORD113-5-201ENST00000607261 78 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 MIR203B-201ENST00000636080 86 ntBASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TBC1D3FA6NER0 AC007336.1-201ENST00000576365 3828 ntBASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 RNU6-1266P-201ENST00000362794 105 ntBASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 Y_RNA.287-201ENST00000364853 94 ntBASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 Y_RNA.361-201ENST00000365515 120 ntBASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 AC010598.1-201ENST00000510378 103 ntBASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 RNU6-436P-201ENST00000516171 114 ntBASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 MIR3684-201ENST00000579779 74 ntBASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 AL353149.1-201ENST00000610667 244 ntBASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 SDR42E1P4-201ENST00000620894 481 ntBASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 MIR8062-201ENST00000621515 85 ntBASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 MIR338-201ENST00000636369 67 ntBASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TBC1D3FA6NER0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 snoU2-30.2-201ENST00000362805 70 ntBASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 MIR524-201ENST00000385242 87 ntBASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 RNA5SP465-201ENST00000391195 109 ntBASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 AL023284.1-201ENST00000403956 276 ntBASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 AL031003.1-201ENST00000404229 172 ntBASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 SNORD23.1-201ENST00000408212 104 ntBASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 AC027419.1-201ENST00000522976 328 ntBASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 MIR4524B-201ENST00000581569 115 ntBASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TBC1D3FA6NER0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
TBC1D3FA6NER0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
TBC1D3FA6NER0 Y_RNA.84-201ENST00000363011 104 ntBASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 Y_RNA.376-201ENST00000365638 108 ntBASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 Y_RNA.541-201ENST00000384640 113 ntBASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 RNU6-417P-201ENST00000384712 107 ntBASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 RNU6-713P-201ENST00000384761 107 ntBASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 MIR1253-201ENST00000408273 105 ntBASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 AC099677.2-201ENST00000436385 175 ntBASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 RNU6-570P-201ENST00000517051 105 ntBASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 AL161670.1-201ENST00000554348 137 ntBASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 AC005786.1-201ENST00000588553 154 ntBASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 AC012640.5-201ENST00000623897 319 ntBASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 AC127459.3-201ENST00000624328 466 ntBASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TBC1D3FA6NER0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 SNORA27.1-201ENST00000362604 124 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 RNU4-90P-201ENST00000362773 141 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 RNU6-862P-201ENST00000362804 105 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 Y_RNA.124-201ENST00000363339 93 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 RNU6-324P-201ENST00000363957 106 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 Y_RNA.329-201ENST00000365209 107 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 MT-TW-201ENST00000387382 68 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 RNA5SP450-201ENST00000411206 102 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 IPO7P1-201ENST00000442031 636 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 MIR4529-201ENST00000578110 78 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 AC006435.5-201ENST00000624486 112 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 AC245060.5-201ENST00000610778 3293 ntBASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
TBC1D3FA6NER0 MIRLET7G-201ENST00000362280 84 ntBASIC2.13□□□□□ -2.07
TBC1D3FA6NER0 SNORA33-201ENST00000363664 130 ntBASIC2.13□□□□□ -2.07
TBC1D3FA6NER0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms