Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 VN1R91P-201ENST00000594377 169 ntBASIC1.65□□□□□ -2.15
TRIM49BA6NDI0 AL360085.1-201ENST00000604713 532 ntBASIC1.65□□□□□ -2.15
TRIM49BA6NDI0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.65□□□□□ -2.15
TRIM49BA6NDI0 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.65□□□□□ -2.15
TRIM49BA6NDI0 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.65□□□□□ -2.15
TRIM49BA6NDI0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 RNU6-661P-201ENST00000362409 107 ntBASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.179-201ENST00000363844 90 ntBASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 RNU4-13P-201ENST00000364019 141 ntBASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 RNU6-454P-201ENST00000364292 107 ntBASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.338-201ENST00000365320 114 ntBASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.595-201ENST00000410403 105 ntBASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 RPEP5-201ENST00000441137 268 ntBASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 AC016925.1-201ENST00000458303 298 ntBASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 RNU6-408P-201ENST00000515910 100 ntBASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 RNU6-1012P-201ENST00000516606 109 ntBASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 AC136932.1-201ENST00000574771 208 ntBASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 MIR4659A-201ENST00000580269 81 ntBASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM49BA6NDI0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.458-201ENST00000384240 102 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 MIR606-201ENST00000384851 96 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 MIR1283-1-201ENST00000408494 87 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 RNU6-121P-201ENST00000410525 99 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 RNU6-57P-201ENST00000411348 103 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 MTND5P22-201ENST00000458380 195 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 AC023790.1-201ENST00000482174 347 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 RNA5SP61-201ENST00000516453 100 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.683-201ENST00000516508 93 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 RNU6-107P-201ENST00000516643 102 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 RNA5SP54-201ENST00000516951 92 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 RNU6-988P-201ENST00000519081 107 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 AC144568.1-201ENST00000520139 137 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 AC023442.1-201ENST00000531247 422 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 AC015720.1-201ENST00000565251 277 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 AC113195.1-201ENST00000579952 141 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 AL645939.4-201ENST00000604495 135 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 SNORD11B-201ENST00000607707 90 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 AC240442.1-201ENST00000616055 283 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 AL078596.1-201ENST00000624856 447 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 AC008873.1-201ENST00000625051 138 ntBASIC1.63□□□□□ -2.15
TRIM49BA6NDI0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 MIR126-201ENST00000362291 85 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.101-201ENST00000363154 102 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.389-201ENST00000383924 113 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 RNU6-937P-201ENST00000384325 106 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 RNY3P4-201ENST00000384428 101 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 RNU6-1026P-201ENST00000384465 108 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 RNU6-102P-201ENST00000384485 104 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 MTND2P23-201ENST00000422990 651 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 RAB28P5-201ENST00000427490 651 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 AL354695.1-201ENST00000427935 228 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 MTCO1P44-201ENST00000441935 243 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 UQCRBP2-201ENST00000447827 297 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 AC098869.1-201ENST00000481627 292 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 SNORA25.10-201ENST00000515926 124 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 RN7SKP49-201ENST00000516675 260 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 AC027419.1-201ENST00000522976 328 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 AC026470.2-201ENST00000561492 181 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 AC124312.5-201ENST00000604451 268 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 SNRPGP20-201ENST00000604477 205 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 MIR8074-201ENST00000615081 81 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 AC006001.4-201ENST00000622243 395 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 AC068205.3-201ENST00000636385 468 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.62□□□□□ -2.15
TRIM49BA6NDI0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 SNORA63-201ENST00000363450 132 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.143-201ENST00000363520 106 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.158-201ENST00000363651 101 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.210-201ENST00000364161 110 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.286-201ENST00000364813 102 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 SNORD31B-201ENST00000364977 69 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 RNU6-245P-201ENST00000384020 107 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.471-201ENST00000384312 102 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 RNU4-30P-201ENST00000410245 143 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 RPL21P38-201ENST00000418090 167 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 ELOCP20-201ENST00000422460 345 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 AC007395.1-201ENST00000451333 677 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 HMGN1P10-201ENST00000474557 553 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 RNU6-344P-201ENST00000516635 111 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.715-201ENST00000517082 110 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 SUMO2P18-201ENST00000518873 252 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 AC018448.1-201ENST00000552843 316 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 MIR4498-201ENST00000577599 66 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms