Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 RNU5F-3P-201ENST00000363767 117 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-890P-201ENST00000384121 107 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-1145P-201ENST00000384246 107 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 MIR499A-201ENST00000384903 122 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 RNU1-78P-201ENST00000391248 165 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 AL355796.1-201ENST00000406706 323 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-1186P-201ENST00000410429 97 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-955P-201ENST00000410497 104 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 RPS27P16-201ENST00000425758 201 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 UQCRBP2-201ENST00000447827 297 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 SNORD65B-201ENST00000459126 73 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 RNU7-34P-201ENST00000459394 64 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 COX6CP14-201ENST00000469580 174 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 RPL17P19-201ENST00000489069 552 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 AC023157.2-201ENST00000540596 141 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 AL355073.2-201ENST00000612106 557 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 AL359075.3-201ENST00000613288 217 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 U6.73-201ENST00000619194 103 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 MIR8063-201ENST00000621930 81 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 ICE2P2-201ENST00000483823 2787 ntBASIC1.23□□□□□ -2.21
SMIM28A0A1B0GU29 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-879P-201ENST00000364328 108 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 Y_RNA.303-201ENST00000364998 94 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 AC098614.3-201ENST00000438957 440 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 MRPS10P1-201ENST00000448483 130 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 AC245517.4-201ENST00000448601 281 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 MTCO3P10-201ENST00000455912 772 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 RPL31P58-201ENST00000469001 379 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 RPS26P55-201ENST00000471178 356 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-277P-201ENST00000516272 106 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 AC019176.1-201ENST00000518519 225 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 AL442163.3-201ENST00000554110 156 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 MIR4709-201ENST00000577272 72 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 AL390123.1-201ENST00000603216 237 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 AP001485.1-201ENST00000604799 199 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 AC021506.2-201ENST00000612354 169 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 AC087588.2-201ENST00000617667 426 ntBASIC1.22□□□□□ -2.21
SMIM28A0A1B0GU29 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 RNU6-1266P-201ENST00000362794 105 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 SNORD1A-201ENST00000364968 72 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 RNU6-1264P-201ENST00000383891 107 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 SNORA75.6-201ENST00000391318 127 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 MIR1287-201ENST00000408492 90 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 MRPS18CP6-201ENST00000423587 223 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 RPL23AP50-201ENST00000434149 455 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 AC105758.1-201ENST00000506038 399 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 RNU1-142P-201ENST00000516682 145 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 AL137100.2-201ENST00000555786 315 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 AC005899.2-201ENST00000584353 90 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 MIR4438-201ENST00000585271 93 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 MIR6504-201ENST00000613520 61 ntBASIC1.21□□□□□ -2.22
SMIM28A0A1B0GU29 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 MIR96-201ENST00000362288 78 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 RNU6-1301P-201ENST00000362724 104 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 RNY3P11-201ENST00000364153 102 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 RNU6-454P-201ENST00000364292 107 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 SNORA20B-201ENST00000384220 132 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 SNORD116-29-201ENST00000384516 83 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 MRPL35P1-201ENST00000404272 572 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 COX6CP10-201ENST00000416832 224 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 AC245047.3-201ENST00000429428 127 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 FTH1P12-201ENST00000432137 551 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 AC022493.2-201ENST00000506122 481 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 PRDX4P1-201ENST00000507189 574 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 SNORA40.9-201ENST00000515895 93 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 RN7SKP49-201ENST00000516675 260 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 AC018448.1-201ENST00000552843 316 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 PRR13P7-201ENST00000605538 430 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 AC104260.1-201ENST00000616660 539 ntBASIC1.2□□□□□ -2.22
SMIM28A0A1B0GU29 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 RAB28P5-201ENST00000427490 651 ntBASIC1.19□□□□□ -2.22
SMIM28A0A1B0GU29 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms