Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 Y_RNA.638-201ENST00000459374 113 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.641-201ENST00000459414 105 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 RPS26P55-201ENST00000471178 356 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 SNORA64.4-201ENST00000516632 81 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 MIR4446-201ENST00000578505 67 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 AL442067.1-201ENST00000613261 223 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 AC068647.2-201ENST00000637380 353 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 RNU6-1272P-201ENST00000362776 107 ntBASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.199-201ENST00000364014 102 ntBASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.200-201ENST00000364018 102 ntBASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 SNORA3A-201ENST00000364113 130 ntBASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 RNU6-1164P-201ENST00000364428 107 ntBASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.287-201ENST00000364853 94 ntBASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 SNORD116-13-201ENST00000384408 92 ntBASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 RNA5SP467-201ENST00000391274 118 ntBASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 AL135790.2-201ENST00000437701 267 ntBASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 AC096725.1-201ENST00000514266 313 ntBASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 SUMO2P18-201ENST00000518873 252 ntBASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 AC130289.1-201ENST00000577321 73 ntBASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC163A0A0D9SF12 CENPCP1-201ENST00000533085 2578 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 snoU2-30.2-201ENST00000362805 70 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 RNU4-13P-201ENST00000364019 141 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.368-201ENST00000365547 113 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.456-201ENST00000384232 111 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 RNU11-3P-201ENST00000391111 133 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 SNORA26.5-201ENST00000391215 123 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 BX510359.4-201ENST00000423750 193 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 RPS20P10-201ENST00000451209 253 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.637-201ENST00000459424 114 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 RPS29P21-201ENST00000496272 170 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 RNU1-143P-201ENST00000516296 146 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 RNU7-172P-201ENST00000517125 64 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 AC068657.1-201ENST00000520807 306 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 U1.23-201ENST00000610293 146 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 RNU1-68P-201ENST00000615382 146 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 MIR6817-201ENST00000615588 66 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 U1.39-201ENST00000621562 146 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 AC006435.5-201ENST00000624486 112 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 MIR203B-201ENST00000636080 86 ntBASIC2.8□□□□□ -1.96
CCDC163A0A0D9SF12 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.82-201ENST00000363000 102 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.92-201ENST00000363043 102 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 SNORD56.3-201ENST00000363507 71 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.235-201ENST00000364412 102 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.293-201ENST00000364908 93 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.306-201ENST00000365015 102 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.310-201ENST00000365063 113 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.312-201ENST00000365089 102 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.322-201ENST00000365151 102 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.361-201ENST00000365515 120 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 RNU6-376P-201ENST00000384731 106 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 RNA5SP323-201ENST00000391094 133 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 AC010154.1-201ENST00000425857 269 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 RNU1-131P-201ENST00000458943 161 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.650-201ENST00000459002 102 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 RN7SL633P-201ENST00000488974 297 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 AC117454.1-201ENST00000491120 168 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 RNU6-138P-201ENST00000515952 107 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 RNA5SP24-201ENST00000516478 95 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.777-201ENST00000516982 102 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.771-201ENST00000598668 102 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 AC009779.6-201ENST00000603972 165 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 AL008718.3-201ENST00000610217 321 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 AC073349.3-201ENST00000617616 186 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.789-201ENST00000622480 102 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 AC064859.1-201ENST00000624741 174 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 AC108206.1-201ENST00000570186 4159 ntBASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC163A0A0D9SF12 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 SNORD114-7-201ENST00000362520 77 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 RNU6-862P-201ENST00000362804 105 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.83-201ENST00000363005 113 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 MIR29C-201ENST00000385231 88 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 RNU6-907P-201ENST00000390924 102 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 RNA5SP511-201ENST00000410487 115 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.626-201ENST00000411288 95 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 CR769767.1-201ENST00000436337 346 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 HSPE1P13-201ENST00000451143 297 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 AC104027.1-201ENST00000521887 300 ntBASIC2.78□□□□□ -1.96
CCDC163A0A0D9SF12 MIR3605-201ENST00000583214 100 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms