Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 MRPS10P2-201ENST00000431226 381 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 SNORA40.12-201ENST00000516329 111 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 SNORA18.7-201ENST00000516910 131 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 AC005730.3-201ENST00000583067 366 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 AL158050.2-201ENST00000605336 568 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 SNORA25.18-201ENST00000607153 114 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 AC104260.1-201ENST00000616660 539 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 AC121333.1-201ENST00000567488 2709 ntBASIC-0.23□□□□□ -2.45
TRAV4A0A0B4J268 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 SSR1P2-201ENST00000415208 787 ntBASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 AL008987.1-201ENST00000415528 237 ntBASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 MIR2115-201ENST00000516657 100 ntBASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 AP000240.1-201ENST00000609910 452 ntBASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 MIR8076-201ENST00000611401 83 ntBASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.24□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 SNORD114-26-201ENST00000363543 72 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 AL590632.1-201ENST00000424289 371 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 AC009961.2-201ENST00000435771 251 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 ZNF114P1-201ENST00000453500 292 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 MTATP6P14-201ENST00000455189 673 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 RNA5SP20-201ENST00000515976 84 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 RNA5SP94-201ENST00000516917 108 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 MTND2P38-201ENST00000522536 667 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 AC141557.1-201ENST00000540982 400 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 AC087683.2-201ENST00000611384 326 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 MTND4P12-201ENST00000498999 1377 ntBASIC-0.25□□□□□ -2.45
TRAV4A0A0B4J268 SNORD68-201ENST00000363214 84 ntBASIC-0.26□□□□□ -2.45
TRAV4A0A0B4J268 SNORD113-6-201ENST00000363345 75 ntBASIC-0.26□□□□□ -2.45
TRAV4A0A0B4J268 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.26□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-873P-201ENST00000363833 107 ntBASIC-0.26□□□□□ -2.45
TRAV4A0A0B4J268 SNORA32.1-201ENST00000364514 115 ntBASIC-0.26□□□□□ -2.45
TRAV4A0A0B4J268 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.26□□□□□ -2.45
TRAV4A0A0B4J268 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.26□□□□□ -2.45
TRAV4A0A0B4J268 SNORA20B-201ENST00000384220 132 ntBASIC-0.26□□□□□ -2.45
TRAV4A0A0B4J268 MIR644A-201ENST00000385262 94 ntBASIC-0.26□□□□□ -2.45
TRAV4A0A0B4J268 SNORA14.1-201ENST00000516113 141 ntBASIC-0.26□□□□□ -2.45
TRAV4A0A0B4J268 MIR3678-201ENST00000578455 94 ntBASIC-0.26□□□□□ -2.45
TRAV4A0A0B4J268 MIR4251-201ENST00000635819 61 ntBASIC-0.26□□□□□ -2.45
TRAV4A0A0B4J268 SNORD114-5-201ENST00000362928 70 ntBASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-407P-201ENST00000365280 104 ntBASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 AC117470.1-201ENST00000381974 330 ntBASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-456P-201ENST00000384493 107 ntBASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 MIR521-1-201ENST00000384902 87 ntBASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-903P-201ENST00000391270 109 ntBASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 AC091179.3-201ENST00000474761 144 ntBASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 RNA5SP330-201ENST00000517096 96 ntBASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 AC104576.1-201ENST00000524225 88 ntBASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 ELOCP32-201ENST00000548625 324 ntBASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 AC012433.1-201ENST00000588916 398 ntBASIC-0.27□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-280P-201ENST00000364145 104 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-934P-201ENST00000365154 107 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 RNU6-396P-201ENST00000365369 105 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 SNORA8.2-201ENST00000384372 139 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 MIR122-201ENST00000385044 85 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 MIR610-201ENST00000385139 96 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 SNORA75.6-201ENST00000391318 127 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 AL353997.1-201ENST00000432936 108 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 AC091885.1-201ENST00000506658 268 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 AP002963.1-201ENST00000530590 184 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 MIR3684-201ENST00000579779 74 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 MIR5583-1-201ENST00000580941 59 ntBASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.28□□□□□ -2.45
TRAV4A0A0B4J268 SNORA9.1-201ENST00000362412 131 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 RNU6-517P-201ENST00000384362 110 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 MTCYBP4-201ENST00000401524 249 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 AC018865.2-201ENST00000423631 129 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 SNORD123-201ENST00000459473 70 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 RPL23AP54-201ENST00000495129 419 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 AC091144.1-201ENST00000519573 138 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 MIR4804-201ENST00000581683 73 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 AC087683.1-201ENST00000591187 441 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 AC245014.2-201ENST00000603689 287 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 AC246785.4-201ENST00000605374 287 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 TUSC7.1-201ENST00000610969 165 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms