Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 Y_RNA.486-201ENST00000384398 107 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 Y_RNA.531-201ENST00000384589 121 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 Y_RNA.545-201ENST00000384652 105 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 RNU6-1104P-201ENST00000384723 104 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 MIR199A2-201ENST00000385289 110 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 SNORA26-201ENST00000391286 122 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 MIR1912-201ENST00000410389 80 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 RNU4-69P-201ENST00000410677 143 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 AC125388.1-201ENST00000459631 156 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 SEM1P1-201ENST00000506694 209 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 AC096725.1-201ENST00000514266 313 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 AC022523.2-201ENST00000561045 150 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 AL591424.2-201ENST00000617023 128 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 AC091304.10-201ENST00000641554 121 ntBASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DNMT3AQ9Y6K1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
DNMT3AQ9Y6K1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.84□□□□□ -1.8
DNMT3AQ9Y6K1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
DNMT3AQ9Y6K1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
DNMT3AQ9Y6K1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 AC009487.4-201ENST00000624969 3585 ntBASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 RNU6-1274P-201ENST00000384557 107 ntBASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 SNORA11-201ENST00000408789 128 ntBASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 SNRPGP10-201ENST00000432323 225 ntBASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 SCARNA15-202ENST00000516881 127 ntBASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 SUMO2P16-201ENST00000519475 264 ntBASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 RPL23AP91-201ENST00000569211 455 ntBASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 MIR4777-201ENST00000583710 86 ntBASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 Pinc.1-201ENST00000616452 154 ntBASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DNMT3AQ9Y6K1 SNORA27.1-201ENST00000362604 124 ntBASIC3.82□□□□□ -1.8
DNMT3AQ9Y6K1 CD24P4-201ENST00000382840 243 ntBASIC3.82□□□□□ -1.8
DNMT3AQ9Y6K1 MTND4LP19-201ENST00000403051 166 ntBASIC3.82□□□□□ -1.8
DNMT3AQ9Y6K1 NDUFB4P4-201ENST00000404822 243 ntBASIC3.82□□□□□ -1.8
DNMT3AQ9Y6K1 RPS12P18-201ENST00000442381 270 ntBASIC3.82□□□□□ -1.8
DNMT3AQ9Y6K1 RNU7-57P-201ENST00000459540 60 ntBASIC3.82□□□□□ -1.8
DNMT3AQ9Y6K1 AL049873.1-201ENST00000480540 376 ntBASIC3.82□□□□□ -1.8
DNMT3AQ9Y6K1 RN7SL703P-201ENST00000578485 302 ntBASIC3.82□□□□□ -1.8
DNMT3AQ9Y6K1 RNU6-271P-201ENST00000363858 105 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 RNU6-60P-201ENST00000364792 103 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 SNORD31B-201ENST00000364977 69 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 Y_RNA.454-201ENST00000384224 113 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 RNU2-11P-201ENST00000459191 187 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 RPS26P55-201ENST00000471178 356 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 RN7SL323P-201ENST00000494712 295 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 AC093259.1-201ENST00000509755 300 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 RNU7-149P-201ENST00000516739 59 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 SCARNA3-201ENST00000517097 143 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 MIR5685-201ENST00000579080 79 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 AL929325.1-201ENST00000603096 117 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 U6.98-201ENST00000637157 84 ntBASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
DNMT3AQ9Y6K1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 RNU6-944P-201ENST00000364023 107 ntBASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 RNY1P6-201ENST00000384193 109 ntBASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 MIR577-201ENST00000385196 96 ntBASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 AL139095.1-201ENST00000404326 391 ntBASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 MIR1265-201ENST00000408444 86 ntBASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 RN7SKP156-201ENST00000410308 342 ntBASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 SNORD11-201ENST00000459124 84 ntBASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 AC113410.1-201ENST00000505029 247 ntBASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
DNMT3AQ9Y6K1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.79□□□□□ -1.8
DNMT3AQ9Y6K1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.79□□□□□ -1.8
DNMT3AQ9Y6K1 RNU6-832P-201ENST00000363319 107 ntBASIC3.79□□□□□ -1.8
DNMT3AQ9Y6K1 RNU6-509P-201ENST00000363519 107 ntBASIC3.79□□□□□ -1.8
DNMT3AQ9Y6K1 Y_RNA.298-201ENST00000364960 107 ntBASIC3.79□□□□□ -1.8
DNMT3AQ9Y6K1 RNU6-690P-201ENST00000365242 106 ntBASIC3.79□□□□□ -1.8
DNMT3AQ9Y6K1 RNU6-975P-201ENST00000384296 105 ntBASIC3.79□□□□□ -1.8
DNMT3AQ9Y6K1 CYCSP19-201ENST00000411715 316 ntBASIC3.79□□□□□ -1.8
DNMT3AQ9Y6K1 Z98742.3-201ENST00000418637 326 ntBASIC3.79□□□□□ -1.8
DNMT3AQ9Y6K1 RPL30P4-201ENST00000429309 333 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms