Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AC010900.2-201ENST00000604508 210 ntBASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 MIR6810-201ENST00000622701 70 ntBASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 snoU18.1-201ENST00000629629 71 ntBASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 Y_RNA.60-201ENST00000362831 98 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 Y_RNA.65-201ENST00000362846 100 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 RNU6-379P-201ENST00000363813 104 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 RNU6-144P-201ENST00000383951 107 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 RNU6-136P-201ENST00000384663 107 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 SNORD58.1-201ENST00000391313 66 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 BTF3P11-201ENST00000426582 477 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 RN7SKP18-201ENST00000516005 275 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 MIR3605-201ENST00000583214 100 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 POLR3GP1-201ENST00000594073 261 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 AC073349.3-201ENST00000617616 186 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 U6.108-201ENST00000637764 58 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.75□□□□□ -1.81
GTF3C3Q9Y5Q9 Y_RNA.122-201ENST00000363331 96 ntBASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 Y_RNA.515-201ENST00000384535 112 ntBASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 RNU6-763P-201ENST00000390865 106 ntBASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 RNU7-128P-201ENST00000517247 62 ntBASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 MIR4286-201ENST00000580651 93 ntBASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 MIR4282-201ENST00000583613 67 ntBASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 UBL5P2-201ENST00000583788 219 ntBASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 AL049779.4-201ENST00000604500 156 ntBASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 MIR6079-201ENST00000635807 62 ntBASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.74□□□□□ -1.81
GTF3C3Q9Y5Q9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
GTF3C3Q9Y5Q9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
GTF3C3Q9Y5Q9 Y_RNA.172-201ENST00000363765 102 ntBASIC3.73□□□□□ -1.81
GTF3C3Q9Y5Q9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.73□□□□□ -1.81
GTF3C3Q9Y5Q9 AC091390.1-201ENST00000433904 331 ntBASIC3.73□□□□□ -1.81
GTF3C3Q9Y5Q9 RNU7-115P-201ENST00000516433 55 ntBASIC3.73□□□□□ -1.81
GTF3C3Q9Y5Q9 Y_RNA.680-201ENST00000516441 93 ntBASIC3.73□□□□□ -1.81
GTF3C3Q9Y5Q9 SNORA31.11-201ENST00000516528 139 ntBASIC3.73□□□□□ -1.81
GTF3C3Q9Y5Q9 AC013791.1-201ENST00000616619 62 ntBASIC3.73□□□□□ -1.81
GTF3C3Q9Y5Q9 AC141273.2-201ENST00000618989 130 ntBASIC3.73□□□□□ -1.81
GTF3C3Q9Y5Q9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.73□□□□□ -1.81
GTF3C3Q9Y5Q9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
GTF3C3Q9Y5Q9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 Y_RNA.117-201ENST00000363294 101 ntBASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 MTCO2P33-201ENST00000402100 465 ntBASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 RPS29P7-201ENST00000439662 171 ntBASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 Y_RNA.637-201ENST00000459424 114 ntBASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 RNVU1-2-201ENST00000516326 135 ntBASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 RNA5SP367-201ENST00000516557 118 ntBASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 RNU6-341P-201ENST00000516973 96 ntBASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 MIR5692C2-201ENST00000577959 77 ntBASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 AP003357.1-201ENST00000604497 148 ntBASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 MIR548AY-201ENST00000617669 107 ntBASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 AC068724.3-201ENST00000625906 87 ntBASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GTF3C3Q9Y5Q9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
GTF3C3Q9Y5Q9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU6-211P-201ENST00000384047 107 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 SNORA72-201ENST00000384339 132 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU6-950P-201ENST00000384651 107 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 MIR520A-201ENST00000384862 85 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 SNORA26.5-201ENST00000391215 123 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 AL355497.1-201ENST00000406262 551 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 AC104332.1-201ENST00000440471 797 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU7-141P-201ENST00000459304 62 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 Y_RNA.638-201ENST00000459374 113 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 AL358944.1-201ENST00000528537 144 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 SUB1P4-201ENST00000566062 339 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 MIR4697-201ENST00000582977 78 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 AC005357.1-201ENST00000588399 301 ntBASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
GTF3C3Q9Y5Q9 SNORA33-201ENST00000363664 130 ntBASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 RNA5SP210-201ENST00000391034 120 ntBASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU2-7P-201ENST00000410794 178 ntBASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 AL135790.2-201ENST00000437701 267 ntBASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 SNORD2.1-201ENST00000458762 69 ntBASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 AC117454.1-201ENST00000491120 168 ntBASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU6-111P-201ENST00000517179 105 ntBASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 MIR5685-201ENST00000579080 79 ntBASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.7□□□□□ -1.82
GTF3C3Q9Y5Q9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms