Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 AC022441.3-201ENST00000605737 136 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 AC011373.1-201ENST00000607270 237 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 ZNF658B-202ENST00000615961 3375 ntBASIC2.59□□□□□ -2
COL4A3BPQ9Y5P4 Y_RNA.326-201ENST00000365176 113 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-1175P-201ENST00000365200 107 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 Z98742.3-201ENST00000418637 326 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 AC244636.1-201ENST00000421152 228 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 OOSP1P1-201ENST00000423265 274 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 RPL23AP6-201ENST00000446637 472 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-155P-201ENST00000516347 100 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 AC027419.1-201ENST00000522976 328 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 AC055872.1-201ENST00000570978 278 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 AC113195.1-201ENST00000579952 141 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 MIR5694-201ENST00000581190 76 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 MIR6840-201ENST00000611937 71 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 AL773524.1-201ENST00000614065 229 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 U6.73-201ENST00000619194 103 ntBASIC2.58□□□□□ -2
COL4A3BPQ9Y5P4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 AC010615.1-201ENST00000594254 1764 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 SNORA27.1-201ENST00000362604 124 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 Y_RNA.101-201ENST00000363154 102 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 Y_RNA.183-201ENST00000363882 113 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 Y_RNA.446-201ENST00000384178 104 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 SNORA70B-201ENST00000384210 135 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 MIR520A-201ENST00000384862 85 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 AL355796.1-201ENST00000406706 323 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 RNA5SP233-201ENST00000459153 113 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-764P-201ENST00000516396 105 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 SNORA40.15-201ENST00000516884 107 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 AL021879.1-201ENST00000611756 288 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 PART1_1.1-201ENST00000611761 217 ntBASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
COL4A3BPQ9Y5P4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 AL596028.1-201ENST00000326971 197 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 Y_RNA.143-201ENST00000363520 106 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 SNORD115-30-201ENST00000364117 82 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-407P-201ENST00000365280 104 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 MIR144-201ENST00000384886 86 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-985P-201ENST00000410182 104 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 AL135786.1-201ENST00000415892 214 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 RPS15AP28-201ENST00000435088 386 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 AL121890.1-201ENST00000435457 205 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 AC073910.1-201ENST00000445047 438 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 RNU1-41P-201ENST00000516161 162 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 RNU1-48P-201ENST00000516400 162 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 RNU7-110P-201ENST00000516891 62 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 IGLV3-17-201ENST00000519099 244 ntBASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.56□□□□□ -2
COL4A3BPQ9Y5P4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 Y_RNA.276-201ENST00000364732 109 ntBASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-21P-201ENST00000384710 107 ntBASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 RNA5SP467-201ENST00000391274 118 ntBASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 RNA5SP425-201ENST00000410336 112 ntBASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-1186P-201ENST00000410429 97 ntBASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 AL356320.1-201ENST00000429616 163 ntBASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 RNA5SP20-201ENST00000515976 84 ntBASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-397P-201ENST00000516226 104 ntBASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 RNU7-99P-201ENST00000516271 62 ntBASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 AC023157.2-201ENST00000540596 141 ntBASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 AC084364.2-201ENST00000546924 395 ntBASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 RAC1P9-201ENST00000604990 392 ntBASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.55□□□□□ -2
COL4A3BPQ9Y5P4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-324P-201ENST00000363957 106 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 Y_RNA.331-201ENST00000365267 102 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-937P-201ENST00000384325 106 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 U3.40-201ENST00000408706 208 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 RNU2-7P-201ENST00000410794 178 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 RNA5SP100-201ENST00000410903 110 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 RNA5SP59-201ENST00000410922 110 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-130P-201ENST00000411112 103 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 AC009310.1-201ENST00000414414 451 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 RPL23AP7-203ENST00000449021 469 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 MIR4299-201ENST00000577899 72 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 AC116312.1-201ENST00000606841 314 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 MIR376A1-201ENST00000616574 68 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 MIR6766-201ENST00000622641 72 ntBASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.54□□□□□ -2
COL4A3BPQ9Y5P4 U8.2-201ENST00000363156 134 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-112P-201ENST00000363599 104 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 Y_RNA.361-201ENST00000365515 120 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 AL031003.1-201ENST00000404229 172 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms