Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 Y_RNA.570-201ENST00000384750 101 ntBASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 RNU6-713P-201ENST00000384761 107 ntBASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 HMGN2P3-201ENST00000433603 273 ntBASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 HMGN2P5-201ENST00000436882 273 ntBASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 AC136932.1-201ENST00000574771 208 ntBASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 MIR3169-201ENST00000578032 83 ntBASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 MIR3684-201ENST00000579779 74 ntBASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 MIR4300-201ENST00000581016 96 ntBASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 MIR4435-1-201ENST00000582552 80 ntBASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 AL627230.6-201ENST00000611129 280 ntBASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 SNORD113-8-201ENST00000363497 74 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 Y_RNA.276-201ENST00000364732 109 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 RNU6-301P-201ENST00000384277 107 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 RNA5SP465-201ENST00000391195 109 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 RNU2-54P-201ENST00000410299 190 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 AL353689.1-201ENST00000438895 199 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 DYNLT3P2-201ENST00000442517 295 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 AC005042.3-201ENST00000453230 174 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 SNORD65B-201ENST00000459126 73 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 YWHAEP4-201ENST00000505390 198 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 SEPT14P8-201ENST00000508026 178 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 AC010598.1-201ENST00000510378 103 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 AC008749.1-201ENST00000597650 306 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 AC022441.3-201ENST00000605737 136 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 U6.115-201ENST00000636045 103 ntBASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CLDN16Q9Y5I7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 Y_RNA.64-201ENST00000362845 102 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 RNU6-1309P-201ENST00000363305 108 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 Y_RNA.176-201ENST00000363815 109 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 RNU6-806P-201ENST00000365147 105 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 RNU6-417P-201ENST00000384712 107 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 MIR676-201ENST00000390702 67 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 RNU6-1109P-201ENST00000391187 107 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 RPL21P1-201ENST00000399532 476 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 RNA5SP508-201ENST00000411327 119 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 AC016909.1-201ENST00000415916 166 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 LINC01399-202ENST00000458450 244 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 RN7SL429P-201ENST00000479090 223 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 RN7SL489P-201ENST00000486185 223 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 RN7SL327P-201ENST00000488659 223 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 MRPS17P9-201ENST00000511924 393 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 MIR3945-201ENST00000581853 98 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 SNORD113-5-201ENST00000607261 78 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 RN7SL853P-201ENST00000617250 223 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 AL359851.1-201ENST00000569460 4997 ntBASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN16Q9Y5I7 RNA5SP276-201ENST00000362580 94 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 snoU2-30.2-201ENST00000362805 70 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 RNU6-407P-201ENST00000365280 104 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 SNORA20B-201ENST00000384220 132 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 SNORD115-46-201ENST00000390982 71 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 AL356379.1-201ENST00000414105 126 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 AL731563.1-201ENST00000442202 214 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 RPL23AP3-201ENST00000453844 468 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 RPS27P22-201ENST00000478056 241 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 AC098869.1-201ENST00000481627 292 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 RNA5SP200-201ENST00000516360 103 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 RNU2-12P-201ENST00000517216 168 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 AL117187.1-201ENST00000555482 181 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 MIR1273D-201ENST00000577266 86 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 MIR4423-201ENST00000580922 80 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 MIR5002-201ENST00000584713 97 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 U2.15-201ENST00000611544 191 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 U2.16-201ENST00000613119 191 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 U2.12-201ENST00000613778 191 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 U2.20-201ENST00000613956 192 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 U2.9-201ENST00000615427 191 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 U2.11-201ENST00000616345 191 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 U2.2-201ENST00000616535 191 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 U2.3-201ENST00000617785 191 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 U2.19-201ENST00000618602 191 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 RNU2-1-201ENST00000618664 191 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 U2.6-201ENST00000619225 191 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms