Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RN7SL297P-201ENST00000483161 293 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 RNU6-826P-201ENST00000516827 104 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 DEFB108E-201ENST00000524692 240 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 AC005786.1-201ENST00000588553 154 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 AL512605.2-201ENST00000592972 256 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 AP001282.2-201ENST00000616149 309 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PCDHGA9Q9Y5G4 SNORD114-6-201ENST00000364393 72 ntBASIC2.56□□□□□ -2
PCDHGA9Q9Y5G4 MT-TG-201ENST00000387429 68 ntBASIC2.56□□□□□ -2
PCDHGA9Q9Y5G4 SNORA11.4-201ENST00000408823 129 ntBASIC2.56□□□□□ -2
PCDHGA9Q9Y5G4 AC018634.1-201ENST00000437554 401 ntBASIC2.56□□□□□ -2
PCDHGA9Q9Y5G4 HSPE1P13-201ENST00000451143 297 ntBASIC2.56□□□□□ -2
PCDHGA9Q9Y5G4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.56□□□□□ -2
PCDHGA9Q9Y5G4 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
PCDHGA9Q9Y5G4 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
PCDHGA9Q9Y5G4 AL590808.1-201ENST00000618696 141 ntBASIC2.56□□□□□ -2
PCDHGA9Q9Y5G4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.56□□□□□ -2
PCDHGA9Q9Y5G4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 snoU2-30.2-201ENST00000362805 70 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 SNORD115-3-201ENST00000363100 82 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 Y_RNA.237-201ENST00000364439 102 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 Y_RNA.352-201ENST00000365439 102 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 RNU6-574P-201ENST00000384265 107 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 AL355796.1-201ENST00000406706 323 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 AC016909.1-201ENST00000415916 166 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 AL121890.1-201ENST00000435457 205 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 RPL23AP7-203ENST00000449021 469 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 TRBV12-1-201ENST00000479785 344 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 AC096725.1-201ENST00000514266 313 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 AC004486.1-201ENST00000546846 233 ntBASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHGA9Q9Y5G4 Y_RNA.14-201ENST00000362415 103 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 RNU1-112P-201ENST00000364401 164 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 Y_RNA.350-201ENST00000365409 98 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 HMGN2P39-201ENST00000398005 273 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 MIR1261-201ENST00000408659 82 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 RNU2-61P-201ENST00000411069 191 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 HMGN2P34-201ENST00000437647 269 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 RPL23AP3-201ENST00000453844 468 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 RPS27P22-201ENST00000478056 241 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 RNA5SP20-201ENST00000515976 84 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 MIR3169-201ENST00000578032 83 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 AC022202.1-201ENST00000613515 211 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 MIR6817-201ENST00000615588 66 ntBASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
PCDHGA9Q9Y5G4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 SNORA67.1-201ENST00000364749 141 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 RNU6-407P-201ENST00000365280 104 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 SNORA70B-201ENST00000384210 135 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 Y_RNA.489-201ENST00000384410 101 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 Y_RNA.562-201ENST00000384695 113 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 MIR512-1-201ENST00000384913 84 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 MIR518A2-201ENST00000384966 87 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 CST2P1-201ENST00000425770 87 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 AC024995.1-201ENST00000523014 93 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 MIR4529-201ENST00000578110 78 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 AC007229.1-201ENST00000590455 412 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 AC006006.1-201ENST00000603082 144 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 AL049779.4-201ENST00000604500 156 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 SNORD14A-201ENST00000606526 91 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 AC010297.1-201ENST00000623948 149 ntBASIC2.53□□□□□ -2
PCDHGA9Q9Y5G4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.53□□□□□ -2.01
PCDHGA9Q9Y5G4 Y_RNA.16-201ENST00000362421 102 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 Y_RNA.188-201ENST00000363952 111 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 SNORA25.6-201ENST00000364121 118 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 RNU6-505P-201ENST00000384427 107 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 RNU11-3P-201ENST00000391111 133 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 MRPS10P1-201ENST00000448483 130 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 RPS26P55-201ENST00000471178 356 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 RPS29P21-201ENST00000496272 170 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 RNU6-1278P-201ENST00000516130 107 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 RNU6-966P-201ENST00000516479 104 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 SNORA27.4-201ENST00000516650 95 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 SCARNA24.2-201ENST00000516968 130 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 DEFB117-201ENST00000602356 141 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 U6.73-201ENST00000619194 103 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 MIR338-201ENST00000636369 67 ntBASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PCDHGA9Q9Y5G4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
PCDHGA9Q9Y5G4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PCDHGA9Q9Y5G4 MIR26A1-201ENST00000362205 77 ntBASIC2.51□□□□□ -2.01
PCDHGA9Q9Y5G4 RNU1-51P-201ENST00000365345 176 ntBASIC2.51□□□□□ -2.01
PCDHGA9Q9Y5G4 Y_RNA.418-201ENST00000384029 102 ntBASIC2.51□□□□□ -2.01
PCDHGA9Q9Y5G4 Y_RNA.456-201ENST00000384232 111 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 262.7 ms