Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC090517.2-201ENST00000614966 680 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 Y_RNA.453-201ENST00000384223 109 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 SNORD41-201ENST00000386967 70 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 MIR190B-201ENST00000401119 79 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 MTCYBP4-201ENST00000401524 249 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 Y_RNA.595-201ENST00000410403 105 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-1054P-201ENST00000411293 104 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 UQCRBP2-201ENST00000447827 297 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 AC026782.1-201ENST00000512952 449 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 RNA5SP168-201ENST00000516642 112 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 MIR4778-201ENST00000577635 80 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 AC091178.2-201ENST00000584401 117 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 AC005014.2-201ENST00000607795 599 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 AC093913.1-201ENST00000614178 329 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 AL133216.2-202ENST00000634512 349 ntBASIC0.92□□□□□ -2.26
KCNIP3Q9Y2W7 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 MIR410-201ENST00000362222 80 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 SNORA27.1-201ENST00000362604 124 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-593P-201ENST00000364716 112 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 Y_RNA.364-201ENST00000365532 101 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-1145P-201ENST00000384246 107 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 Y_RNA.500-201ENST00000384466 111 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 AC018865.2-201ENST00000423631 129 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 AL589823.1-201ENST00000429577 183 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 CALM2P4-201ENST00000430810 426 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-329P-201ENST00000459618 107 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 AC091021.1-201ENST00000468051 388 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 OR9P1P-201ENST00000496431 281 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 AC105758.1-201ENST00000506038 399 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 AC074133.1-201ENST00000515696 183 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 SNORA31.2-201ENST00000516019 134 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 Y_RNA.682-201ENST00000516457 100 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-1016P-201ENST00000516689 94 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 RNU7-28P-201ENST00000516759 62 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-341P-201ENST00000516973 96 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 SNORA70.22-201ENST00000517160 124 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 AC090049.2-201ENST00000550377 109 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 RPL21P9-201ENST00000556149 474 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 AC018638.8-201ENST00000588755 281 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 AL357075.2-201ENST00000614906 189 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 AC073544.1-201ENST00000600110 1595 ntBASIC0.91□□□□□ -2.26
KCNIP3Q9Y2W7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.265-201ENST00000364677 108 ntBASIC0.9□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.318-201ENST00000365131 97 ntBASIC0.9□□□□□ -2.27
KCNIP3Q9Y2W7 SNORD116-4-201ENST00000384733 96 ntBASIC0.9□□□□□ -2.27
KCNIP3Q9Y2W7 MIR19B1-201ENST00000384829 87 ntBASIC0.9□□□□□ -2.27
KCNIP3Q9Y2W7 SNORD115-47-201ENST00000391226 86 ntBASIC0.9□□□□□ -2.27
KCNIP3Q9Y2W7 RNA5SP20-201ENST00000515976 84 ntBASIC0.9□□□□□ -2.27
KCNIP3Q9Y2W7 SNORA31.4-201ENST00000516049 129 ntBASIC0.9□□□□□ -2.27
KCNIP3Q9Y2W7 RNU2-56P-201ENST00000516826 190 ntBASIC0.9□□□□□ -2.27
KCNIP3Q9Y2W7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.9□□□□□ -2.27
KCNIP3Q9Y2W7 AC104260.1-201ENST00000616660 539 ntBASIC0.9□□□□□ -2.27
KCNIP3Q9Y2W7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
KCNIP3Q9Y2W7 RNU4-79P-201ENST00000362764 141 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-457P-201ENST00000363999 107 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 MIR222-201ENST00000384992 110 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-700P-201ENST00000391043 107 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 U8.16-201ENST00000391279 133 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.594-201ENST00000410373 140 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 MTCYBP10-201ENST00000424905 650 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 AL121890.1-201ENST00000435457 205 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 AC245047.7-201ENST00000440265 293 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 AC048334.1-201ENST00000477975 159 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 RNU1-41P-201ENST00000516161 162 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-917P-201ENST00000516294 104 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 RNU1-48P-201ENST00000516400 162 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 RN7SKP49-201ENST00000516675 260 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 AP002004.2-201ENST00000531656 154 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 DNAJC19P9-201ENST00000555084 351 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 MIR4421-201ENST00000578133 69 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 AC005828.6-201ENST00000606610 232 ntBASIC0.89□□□□□ -2.27
KCNIP3Q9Y2W7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-874P-201ENST00000362390 105 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 SNORA1B-201ENST00000362535 133 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 RNA5SP361-201ENST00000362686 118 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-407P-201ENST00000365280 104 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-910P-201ENST00000390844 107 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 AL451046.2-201ENST00000403074 277 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 MIR548K-201ENST00000408406 116 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 AC074085.1-201ENST00000413598 418 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 AL137792.2-201ENST00000443484 235 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 UBE2V1P7-201ENST00000446395 340 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 AC018448.1-201ENST00000552843 316 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 MIR4513-201ENST00000581077 86 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 AC080078.2-201ENST00000603766 501 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 AL512598.1-201ENST00000610158 273 ntBASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms