Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 MIR583-201ENST00000384846 75 ntBASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 AL512604.1-201ENST00000404812 257 ntBASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 RNA5SP475-201ENST00000410568 110 ntBASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 RNU5A-5P-201ENST00000411054 116 ntBASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 ELOCP21-201ENST00000412558 336 ntBASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 AL356379.1-201ENST00000414105 126 ntBASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 AL390729.2-201ENST00000416137 156 ntBASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 AL731563.1-201ENST00000442202 214 ntBASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 AC016925.1-201ENST00000458303 298 ntBASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 RPL26P26-201ENST00000480251 434 ntBASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDK11AQ9UQ88 SNORD115-3-201ENST00000363100 82 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 RNU6-626P-201ENST00000363354 107 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 Y_RNA.133-201ENST00000363428 110 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 RNU6-770P-201ENST00000363929 105 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 SNORD87-201ENST00000364849 89 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 SNORA72.2-201ENST00000365028 127 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 RNU6-713P-201ENST00000384761 107 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 MIR1302-3-201ENST00000408128 138 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 RNA5SP504-201ENST00000410676 117 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 RNU6-130P-201ENST00000411112 103 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 TOMM22P2-201ENST00000430735 237 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 HMGN2P9-201ENST00000476875 229 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 AK6P2-201ENST00000549020 471 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 AC005176.2-201ENST00000596933 147 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 LINC02555-201ENST00000563933 1951 ntBASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDK11AQ9UQ88 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 AC009487.4-201ENST00000624969 3585 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 Y_RNA.143-201ENST00000363520 106 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 Y_RNA.214-201ENST00000364201 112 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 SNORD63-201ENST00000384262 68 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 Y_RNA.574-201ENST00000384766 95 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 RNA5SP465-201ENST00000391195 109 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 RPL21P1-201ENST00000399532 476 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 AL139156.1-201ENST00000412785 841 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 CYCSP49-201ENST00000420810 319 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 RAB28P5-201ENST00000427490 651 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 RNA5SP233-201ENST00000459153 113 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 AC093259.1-201ENST00000509755 300 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 MIR376A1-201ENST00000616574 68 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 MIR3674-201ENST00000636576 68 ntBASIC3.18□□□□□ -1.9
CDK11AQ9UQ88 MIR410-201ENST00000362222 80 ntBASIC3.17□□□□□ -1.9
CDK11AQ9UQ88 Y_RNA.19-201ENST00000362462 99 ntBASIC3.17□□□□□ -1.9
CDK11AQ9UQ88 RNA5SP276-201ENST00000362580 94 ntBASIC3.17□□□□□ -1.9
CDK11AQ9UQ88 RNU6-961P-201ENST00000363893 105 ntBASIC3.17□□□□□ -1.9
CDK11AQ9UQ88 RNU6-20P-201ENST00000384106 107 ntBASIC3.17□□□□□ -1.9
CDK11AQ9UQ88 MIR1262-201ENST00000408276 93 ntBASIC3.17□□□□□ -1.9
CDK11AQ9UQ88 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDK11AQ9UQ88 ELOCP20-201ENST00000422460 345 ntBASIC3.17□□□□□ -1.9
CDK11AQ9UQ88 MTCO2P24-201ENST00000515611 426 ntBASIC3.17□□□□□ -1.9
CDK11AQ9UQ88 RNU6-948P-201ENST00000516374 107 ntBASIC3.17□□□□□ -1.9
CDK11AQ9UQ88 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.17□□□□□ -1.9
CDK11AQ9UQ88 AP000942.3-201ENST00000603702 160 ntBASIC3.17□□□□□ -1.9
CDK11AQ9UQ88 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 Y_RNA.47-201ENST00000362697 108 ntBASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 RNU6-238P-201ENST00000363313 106 ntBASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 AC123900.1-201ENST00000420390 96 ntBASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 AC005002.2-201ENST00000438228 269 ntBASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 Y_RNA.676-201ENST00000516393 96 ntBASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 RNU2-34P-201ENST00000516534 121 ntBASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 MIR514B-201ENST00000516774 80 ntBASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 Y_RNA.783-201ENST00000613546 102 ntBASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 ZNF720P1-201ENST00000562403 1939 ntBASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 ZNF702P-202ENST00000434269 1966 ntBASIC3.16□□□□□ -1.9
CDK11AQ9UQ88 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDK11AQ9UQ88 Y_RNA.332-201ENST00000365271 113 ntBASIC3.15□□□□□ -1.91
CDK11AQ9UQ88 RNU6-975P-201ENST00000384296 105 ntBASIC3.15□□□□□ -1.91
CDK11AQ9UQ88 MTCYBP9-201ENST00000431021 303 ntBASIC3.15□□□□□ -1.91
CDK11AQ9UQ88 MTND2P29-201ENST00000438595 412 ntBASIC3.15□□□□□ -1.91
CDK11AQ9UQ88 AL353689.1-201ENST00000438895 199 ntBASIC3.15□□□□□ -1.91
CDK11AQ9UQ88 DYNLT3P2-201ENST00000442517 295 ntBASIC3.15□□□□□ -1.91
CDK11AQ9UQ88 RNU7-57P-201ENST00000459540 60 ntBASIC3.15□□□□□ -1.91
CDK11AQ9UQ88 HMGN1P10-201ENST00000474557 553 ntBASIC3.15□□□□□ -1.91
CDK11AQ9UQ88 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.15□□□□□ -1.91
CDK11AQ9UQ88 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.15□□□□□ -1.91
CDK11AQ9UQ88 MIRLET7G-201ENST00000362280 84 ntBASIC3.14□□□□□ -1.91
CDK11AQ9UQ88 Y_RNA.99-201ENST00000363138 105 ntBASIC3.14□□□□□ -1.91
CDK11AQ9UQ88 MIR548B-201ENST00000385247 97 ntBASIC3.14□□□□□ -1.91
CDK11AQ9UQ88 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.14□□□□□ -1.91
CDK11AQ9UQ88 AC025465.3-201ENST00000510570 311 ntBASIC3.14□□□□□ -1.91
CDK11AQ9UQ88 AC011373.1-201ENST00000607270 237 ntBASIC3.14□□□□□ -1.91
CDK11AQ9UQ88 U6.104-201ENST00000637979 90 ntBASIC3.14□□□□□ -1.91
CDK11AQ9UQ88 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms