Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AP002001.1-203ENST00000534002 267 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 MIR3684-201ENST00000579779 74 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 Y_RNA.772-201ENST00000606692 102 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 MIR3674-201ENST00000636576 68 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.24□□□□□ -2.05
LRFN1Q9P244 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LRFN1Q9P244 Y_RNA.149-201ENST00000363558 117 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 RNU6-961P-201ENST00000363893 105 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 RNU6-770P-201ENST00000363929 105 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 RNU6-574P-201ENST00000384265 107 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 RNU6-463P-201ENST00000384340 107 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 Y_RNA.512-201ENST00000384518 102 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 MIR17-201ENST00000385012 84 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 RNA5SP181-201ENST00000410246 98 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 RNA5SP425-201ENST00000410336 112 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 HMGN2P34-201ENST00000437647 269 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 DYNLT3P2-201ENST00000442517 295 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 RNY3P15-201ENST00000516297 97 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 RNVU1-2-201ENST00000516326 135 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.23□□□□□ -2.05
LRFN1Q9P244 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.23□□□□□ -2.05
LRFN1Q9P244 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.23□□□□□ -2.05
LRFN1Q9P244 MIR4503-201ENST00000582187 83 ntBASIC2.23□□□□□ -2.05
LRFN1Q9P244 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
LRFN1Q9P244 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
LRFN1Q9P244 AL596028.1-201ENST00000326971 197 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 Y_RNA.26-201ENST00000362539 101 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 RNU6-862P-201ENST00000362804 105 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 Y_RNA.183-201ENST00000363882 113 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 Y_RNA.222-201ENST00000364264 102 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 Y_RNA.276-201ENST00000364732 109 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 RNU6-806P-201ENST00000365147 105 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 AL079342.1-201ENST00000401460 267 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 SNORA11.4-201ENST00000408823 129 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.22□□□□□ -2.05
LRFN1Q9P244 CST2P1-201ENST00000425770 87 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.22□□□□□ -2.05
LRFN1Q9P244 SNORA40.15-201ENST00000516884 107 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 SUB1P4-201ENST00000566062 339 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.22□□□□□ -2.05
LRFN1Q9P244 7SK.10-201ENST00000621414 298 ntBASIC2.22□□□□□ -2.05
LRFN1Q9P244 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.22□□□□□ -2.05
LRFN1Q9P244 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
LRFN1Q9P244 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
LRFN1Q9P244 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
LRFN1Q9P244 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.21□□□□□ -2.06
LRFN1Q9P244 Y_RNA.19-201ENST00000362462 99 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 RNA5SP276-201ENST00000362580 94 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 Y_RNA.64-201ENST00000362845 102 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 Y_RNA.287-201ENST00000364853 94 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 SNORA72.2-201ENST00000365028 127 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.21□□□□□ -2.06
LRFN1Q9P244 Y_RNA.439-201ENST00000384119 94 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 RNU6-196P-201ENST00000384315 107 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 SNORA8-201ENST00000384574 139 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 SNORA80E-201ENST00000384744 137 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 MIR1253-201ENST00000408273 105 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 AL356379.1-201ENST00000414105 126 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.21□□□□□ -2.06
LRFN1Q9P244 IGKV3-31-201ENST00000523109 329 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 AC006435.5-201ENST00000624486 112 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 MIR1291-201ENST00000627649 87 ntBASIC2.21□□□□□ -2.06
LRFN1Q9P244 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
LRFN1Q9P244 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LRFN1Q9P244 Y_RNA.105-201ENST00000363182 111 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 Y_RNA.143-201ENST00000363520 106 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 RNU6-454P-201ENST00000364292 107 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 MIR515-2-201ENST00000384883 83 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 MIR515-1-201ENST00000384884 83 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 AL135786.1-201ENST00000415892 214 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 AL731563.1-201ENST00000442202 214 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 LINC01399-202ENST00000458450 244 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 AC026436.1-201ENST00000510537 270 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.2□□□□□ -2.06
LRFN1Q9P244 MIR4648-201ENST00000580107 72 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 AC069114.2-201ENST00000604699 304 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.2□□□□□ -2.06
LRFN1Q9P244 RNU6-626P-201ENST00000363354 107 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 RNU1-96P-201ENST00000364163 162 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 RNU2-20P-201ENST00000410425 191 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 RNU6-121P-201ENST00000410525 99 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 RN7SKP223-201ENST00000410582 62 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.19□□□□□ -2.06
LRFN1Q9P244 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.19□□□□□ -2.06
LRFN1Q9P244 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.19□□□□□ -2.06
LRFN1Q9P244 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.19□□□□□ -2.06
LRFN1Q9P244 SNORD65B-201ENST00000459126 73 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 AC010598.1-201ENST00000510378 103 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.19□□□□□ -2.06
LRFN1Q9P244 AC136932.1-201ENST00000574771 208 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 MIR5094-201ENST00000578766 85 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 MIR4287-201ENST00000579398 78 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 AC005176.2-201ENST00000596933 147 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 AC005828.6-201ENST00000606610 232 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 AC103810.6-201ENST00000606708 136 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms