Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.49□□□□□ -2.01
VSX1Q9NZR4 Y_RNA.637-201ENST00000459424 114 ntBASIC2.49□□□□□ -2.01
VSX1Q9NZR4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.49□□□□□ -2.01
VSX1Q9NZR4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.49□□□□□ -2.01
VSX1Q9NZR4 RNU6-965P-201ENST00000516721 96 ntBASIC2.49□□□□□ -2.01
VSX1Q9NZR4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VSX1Q9NZR4 ZNF861P-201ENST00000588126 639 ntBASIC2.49□□□□□ -2.01
VSX1Q9NZR4 AL365265.1-201ENST00000621045 234 ntBASIC2.49□□□□□ -2.01
VSX1Q9NZR4 U6.106-201ENST00000636360 105 ntBASIC2.49□□□□□ -2.01
VSX1Q9NZR4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VSX1Q9NZR4 AC080100.1-201ENST00000624239 5356 ntBASIC2.49□□□□□ -2.01
VSX1Q9NZR4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VSX1Q9NZR4 CENPCP1-201ENST00000533085 2578 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VSX1Q9NZR4 Y_RNA.121-201ENST00000363309 113 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 RNU1-23P-201ENST00000363361 144 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 RNU6-801P-201ENST00000364087 105 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 SNORA72.4-201ENST00000384174 132 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 SNORA9-201ENST00000384215 133 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 Y_RNA.464-201ENST00000384282 110 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 AL603908.1-201ENST00000406098 201 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 OOSP1P1-201ENST00000423265 274 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 AL121890.1-201ENST00000435457 205 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 CR769767.1-201ENST00000436337 346 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 AC091826.1-201ENST00000514065 313 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.48□□□□□ -2.01
VSX1Q9NZR4 SNORA70.24-201ENST00000517233 118 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 AC087441.2-201ENST00000529141 262 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 MIR3670-2-201ENST00000582974 65 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 MIR3670-1-201ENST00000584160 65 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 MIR3670-3-201ENST00000584855 65 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 MIR3670-4-201ENST00000612260 65 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 AC013791.1-201ENST00000616619 62 ntBASIC2.48□□□□□ -2.01
VSX1Q9NZR4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VSX1Q9NZR4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VSX1Q9NZR4 RNU6-763P-201ENST00000390865 106 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 AL355796.1-201ENST00000406706 323 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 RNU2-48P-201ENST00000410694 191 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 EDDM3CP-201ENST00000415977 425 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 AL139132.1-201ENST00000431587 344 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 AC009238.1-201ENST00000442165 424 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 AC009237.6-201ENST00000446969 424 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 AC245102.2-201ENST00000448956 180 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 RPS26P55-201ENST00000471178 356 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 RN7SL297P-201ENST00000483161 293 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.47□□□□□ -2.01
VSX1Q9NZR4 RNU7-116P-201ENST00000516940 62 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.47□□□□□ -2.01
VSX1Q9NZR4 AC074050.1-201ENST00000563247 211 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.47□□□□□ -2.01
VSX1Q9NZR4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.47□□□□□ -2.01
VSX1Q9NZR4 AL008718.3-201ENST00000610217 321 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 AL162274.2-201ENST00000614406 332 ntBASIC2.47□□□□□ -2.01
VSX1Q9NZR4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.47□□□□□ -2.01
VSX1Q9NZR4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VSX1Q9NZR4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VSX1Q9NZR4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
VSX1Q9NZR4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.46□□□□□ -2.02
VSX1Q9NZR4 RNU6-653P-201ENST00000363074 106 ntBASIC2.46□□□□□ -2.02
VSX1Q9NZR4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.46□□□□□ -2.02
VSX1Q9NZR4 SNORA25B-201ENST00000365507 128 ntBASIC2.46□□□□□ -2.02
VSX1Q9NZR4 RNU6-418P-201ENST00000384035 107 ntBASIC2.46□□□□□ -2.02
VSX1Q9NZR4 MIR491-201ENST00000384877 84 ntBASIC2.46□□□□□ -2.02
VSX1Q9NZR4 AC016717.1-201ENST00000448918 286 ntBASIC2.46□□□□□ -2.02
VSX1Q9NZR4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.46□□□□□ -2.02
VSX1Q9NZR4 RNA5SP20-201ENST00000515976 84 ntBASIC2.46□□□□□ -2.02
VSX1Q9NZR4 RNU6-856P-201ENST00000516959 98 ntBASIC2.46□□□□□ -2.02
VSX1Q9NZR4 SUMO2P18-201ENST00000518873 252 ntBASIC2.46□□□□□ -2.02
VSX1Q9NZR4 MIR4325-201ENST00000583049 90 ntBASIC2.46□□□□□ -2.02
VSX1Q9NZR4 AC013412.1-201ENST00000610687 192 ntBASIC2.46□□□□□ -2.02
VSX1Q9NZR4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VSX1Q9NZR4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.46□□□□□ -2.02
VSX1Q9NZR4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VSX1Q9NZR4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.45□□□□□ -2.02
VSX1Q9NZR4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
VSX1Q9NZR4 Y_RNA.233-201ENST00000364407 101 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 RNU6-1323P-201ENST00000384025 107 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 SNORD14D-201ENST00000384390 87 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 RNU6-918P-201ENST00000391219 106 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 RN7SKP284-201ENST00000411002 343 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.45□□□□□ -2.02
VSX1Q9NZR4 AC104389.3-201ENST00000445629 235 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 RNU1-131P-201ENST00000458943 161 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 AC010531.2-201ENST00000465012 153 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 S100A11P2-201ENST00000467589 312 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 Y_RNA.662-201ENST00000516028 97 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 RNU6-667P-201ENST00000517186 102 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 AL137100.2-201ENST00000555786 315 ntBASIC2.45□□□□□ -2.02
VSX1Q9NZR4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.45□□□□□ -2.02
VSX1Q9NZR4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VSX1Q9NZR4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
VSX1Q9NZR4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.45□□□□□ -2.02
VSX1Q9NZR4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
VSX1Q9NZR4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
VSX1Q9NZR4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.44□□□□□ -2.02
VSX1Q9NZR4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.44□□□□□ -2.02
VSX1Q9NZR4 SNORA44-201ENST00000384584 132 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms