Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 HMGN2P10-201ENST00000448085 265 ntBASIC2.98□□□□□ -1.93
SMPD4Q9NXE4 RNU5F-2P-201ENST00000516066 82 ntBASIC2.98□□□□□ -1.93
SMPD4Q9NXE4 AC079600.2-201ENST00000550076 130 ntBASIC2.98□□□□□ -1.93
SMPD4Q9NXE4 MIR4319-201ENST00000577285 85 ntBASIC2.98□□□□□ -1.93
SMPD4Q9NXE4 MIR5688-201ENST00000580619 83 ntBASIC2.98□□□□□ -1.93
SMPD4Q9NXE4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.98□□□□□ -1.93
SMPD4Q9NXE4 U6.115-201ENST00000636045 103 ntBASIC2.98□□□□□ -1.93
SMPD4Q9NXE4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.98□□□□□ -1.93
SMPD4Q9NXE4 MAPK10-322ENST00000641485 4530 ntBASIC2.98□□□□□ -1.93
SMPD4Q9NXE4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 AC103988.1-201ENST00000566382 2177 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 AC008555.8-201ENST00000623602 2168 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 MIR450A1-201ENST00000362262 91 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 MIR367-201ENST00000362299 68 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 SNORA20B-201ENST00000384220 132 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 Y_RNA.495-201ENST00000384435 112 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 SNORD116-21-201ENST00000384507 92 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 RNA5SP201-201ENST00000410316 124 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 RNA5SP38-201ENST00000410750 119 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 Z82209.1-201ENST00000422141 2135 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 TRIAP1P1-201ENST00000427062 225 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 Y_RNA.651-201ENST00000459380 103 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 AIG1P1-201ENST00000503376 148 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 SNORA31.1-201ENST00000515993 133 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 SNORA31.5-201ENST00000516190 133 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 RNU1-117P-201ENST00000517041 158 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 ACA59.2-201ENST00000517061 156 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 AL670379.3-201ENST00000605040 251 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 AC025754.2-201ENST00000606491 432 ntBASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.97□□□□□ -1.93
SMPD4Q9NXE4 AC093010.3-201ENST00000570269 15214 ntBASIC2.96□□□□□ -1.93
SMPD4Q9NXE4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 Y_RNA.40-201ENST00000362645 93 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 RNU6-487P-201ENST00000365430 104 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 Y_RNA.369-201ENST00000365568 117 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 DYNLT3P1-201ENST00000378574 347 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 NDUFS5P4-201ENST00000412983 318 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 MLLT10P1-201ENST00000418346 262 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 AC027124.2-201ENST00000428249 105 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 AC004386.2-201ENST00000441858 148 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 SNRPGP8-201ENST00000454064 226 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 RNU6-344P-201ENST00000516635 111 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 AC021739.1-201ENST00000559631 174 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 Y_RNA.757-201ENST00000578934 114 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 SNORD11B-201ENST00000607707 90 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 PCGEM1.1-201ENST00000613431 131 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 AC068205.3-201ENST00000636385 468 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 AC068647.2-201ENST00000637380 353 ntBASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.96□□□□□ -1.94
SMPD4Q9NXE4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 AC096644.4-201ENST00000563417 2912 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 RNU6-508P-201ENST00000363231 103 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 Y_RNA.114-201ENST00000363265 113 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 SNORA67.2-201ENST00000384300 149 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 MIR320B2-201ENST00000408479 138 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 AC117454.1-201ENST00000491120 168 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 RNU6-1061P-201ENST00000516530 99 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 AC090142.3-201ENST00000519012 385 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 MIR3923-201ENST00000579521 83 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 MIR4672-201ENST00000583126 81 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 MIR3136-201ENST00000583498 78 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 RPL12P50-201ENST00000603116 116 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 AL034555.1-201ENST00000604816 211 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 MIR6076-201ENST00000617521 113 ntBASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMPD4Q9NXE4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 AC002543.1-201ENST00000299783 1954 ntBASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 SNORD58C-201ENST00000365223 64 ntBASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 SNORA18.2-201ENST00000383865 132 ntBASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 RNU6-144P-201ENST00000383951 107 ntBASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 TOMM22P2-201ENST00000430735 237 ntBASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 AC108938.1-201ENST00000451204 136 ntBASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 AC133485.4-201ENST00000561835 220 ntBASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 AC138907.4-201ENST00000570107 226 ntBASIC2.94□□□□□ -1.94
SMPD4Q9NXE4 MIR378D2-201ENST00000580636 98 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms