Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HPF1Q9NWY4 RNU6-1080P-201ENST00000383982 107 ntBASIC0.95□□□□□ -2.26
HPF1Q9NWY4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HPF1Q9NWY4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.95□□□□□ -2.26
HPF1Q9NWY4 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
HPF1Q9NWY4 AP000870.1-201ENST00000472927 406 ntBASIC0.95□□□□□ -2.26
HPF1Q9NWY4 AC091144.1-201ENST00000519573 138 ntBASIC0.95□□□□□ -2.26
HPF1Q9NWY4 AL590705.4-201ENST00000532209 134 ntBASIC0.95□□□□□ -2.26
HPF1Q9NWY4 AL121579.1-201ENST00000555129 305 ntBASIC0.95□□□□□ -2.26
HPF1Q9NWY4 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
HPF1Q9NWY4 Y_RNA.124-201ENST00000363339 93 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 SNORD116-9-201ENST00000384000 95 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 SNORD116-3-201ENST00000384287 95 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 SNORD116-7-201ENST00000384404 95 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 SNORD116-5-201ENST00000384462 95 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 MIR10B-201ENST00000385011 110 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.94□□□□□ -2.26
HPF1Q9NWY4 AC243428.1-201ENST00000421099 264 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.94□□□□□ -2.26
HPF1Q9NWY4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.94□□□□□ -2.26
HPF1Q9NWY4 AC022493.2-201ENST00000506122 481 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 Y_RNA.683-201ENST00000516508 93 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.94□□□□□ -2.26
HPF1Q9NWY4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.94□□□□□ -2.26
HPF1Q9NWY4 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.94□□□□□ -2.26
HPF1Q9NWY4 NBR2-204ENST00000587322 63 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 AC136443.5-201ENST00000603741 370 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 AC092954.2-201ENST00000609103 430 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 Z99129.1-201ENST00000612510 255 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.94□□□□□ -2.26
HPF1Q9NWY4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HPF1Q9NWY4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
HPF1Q9NWY4 Y_RNA.135-201ENST00000363439 95 ntBASIC0.93□□□□□ -2.26
HPF1Q9NWY4 Y_RNA.224-201ENST00000364308 111 ntBASIC0.93□□□□□ -2.26
HPF1Q9NWY4 U8.16-201ENST00000391279 133 ntBASIC0.93□□□□□ -2.26
HPF1Q9NWY4 USMG5P1-201ENST00000425964 177 ntBASIC0.93□□□□□ -2.26
HPF1Q9NWY4 MTCO2P7-201ENST00000446518 666 ntBASIC0.93□□□□□ -2.26
HPF1Q9NWY4 RNU7-66P-201ENST00000459469 62 ntBASIC0.93□□□□□ -2.26
HPF1Q9NWY4 AC019235.1-201ENST00000503847 207 ntBASIC0.93□□□□□ -2.26
HPF1Q9NWY4 Y_RNA.704-201ENST00000516851 102 ntBASIC0.93□□□□□ -2.26
HPF1Q9NWY4 AC090142.3-201ENST00000519012 385 ntBASIC0.93□□□□□ -2.26
HPF1Q9NWY4 MIR5696-201ENST00000578474 85 ntBASIC0.93□□□□□ -2.26
HPF1Q9NWY4 MIR4452-201ENST00000583004 71 ntBASIC0.93□□□□□ -2.26
HPF1Q9NWY4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.93□□□□□ -2.26
HPF1Q9NWY4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
HPF1Q9NWY4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
HPF1Q9NWY4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.93□□□□□ -2.26
HPF1Q9NWY4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HPF1Q9NWY4 MIR96-201ENST00000362288 78 ntBASIC0.92□□□□□ -2.26
HPF1Q9NWY4 Y_RNA.267-201ENST00000364679 109 ntBASIC0.92□□□□□ -2.26
HPF1Q9NWY4 RNU6-483P-201ENST00000384088 108 ntBASIC0.92□□□□□ -2.26
HPF1Q9NWY4 AF228730.1-201ENST00000397972 663 ntBASIC0.92□□□□□ -2.26
HPF1Q9NWY4 MIR942-201ENST00000401111 86 ntBASIC0.92□□□□□ -2.26
HPF1Q9NWY4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.92□□□□□ -2.26
HPF1Q9NWY4 RNU7-12P-201ENST00000516030 62 ntBASIC0.92□□□□□ -2.26
HPF1Q9NWY4 Y_RNA.688-201ENST00000516565 95 ntBASIC0.92□□□□□ -2.26
HPF1Q9NWY4 RNU6-113P-201ENST00000516653 101 ntBASIC0.92□□□□□ -2.26
HPF1Q9NWY4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.92□□□□□ -2.26
HPF1Q9NWY4 MIR3684-201ENST00000579779 74 ntBASIC0.92□□□□□ -2.26
HPF1Q9NWY4 MIR4273-201ENST00000582824 84 ntBASIC0.92□□□□□ -2.26
HPF1Q9NWY4 Y_RNA.212-201ENST00000364177 102 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 Y_RNA.256-201ENST00000364594 104 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
HPF1Q9NWY4 RNU6-376P-201ENST00000384731 106 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 RNU6-780P-201ENST00000391030 104 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 RNU6-908P-201ENST00000410160 94 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 MTATP6P17-201ENST00000431030 672 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 AC091021.1-201ENST00000468051 388 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 OR9P1P-201ENST00000496431 281 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 PSMC1P5-201ENST00000512850 177 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 RNU6-1114P-201ENST00000516022 107 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 RNU6-341P-201ENST00000516973 96 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 AP002004.2-201ENST00000531656 154 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.91□□□□□ -2.26
HPF1Q9NWY4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.91□□□□□ -2.26
HPF1Q9NWY4 AC245008.1-201ENST00000608123 476 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 AC008163.1-202ENST00000636004 2889 ntBASIC0.91□□□□□ -2.26
HPF1Q9NWY4 SNORD114-22-201ENST00000365423 72 ntBASIC0.9□□□□□ -2.27
HPF1Q9NWY4 Y_RNA.414-201ENST00000384011 101 ntBASIC0.9□□□□□ -2.27
HPF1Q9NWY4 RNA5SP482-201ENST00000391269 118 ntBASIC0.9□□□□□ -2.27
HPF1Q9NWY4 RPS3AP1-201ENST00000413190 320 ntBASIC0.9□□□□□ -2.27
HPF1Q9NWY4 AC114482.1-201ENST00000418010 247 ntBASIC0.9□□□□□ -2.27
HPF1Q9NWY4 USP9YP16-201ENST00000430287 407 ntBASIC0.9□□□□□ -2.27
HPF1Q9NWY4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.9□□□□□ -2.27
HPF1Q9NWY4 AC093850.1-201ENST00000454121 251 ntBASIC0.9□□□□□ -2.27
HPF1Q9NWY4 USP9YP23-201ENST00000455085 407 ntBASIC0.9□□□□□ -2.27
HPF1Q9NWY4 LINC01399-202ENST00000458450 244 ntBASIC0.9□□□□□ -2.27
HPF1Q9NWY4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.9□□□□□ -2.27
HPF1Q9NWY4 RNU6-197P-201ENST00000516680 100 ntBASIC0.9□□□□□ -2.27
HPF1Q9NWY4 Y_RNA.706-201ENST00000516933 99 ntBASIC0.9□□□□□ -2.27
HPF1Q9NWY4 AC027514.1-201ENST00000588561 1603 ntBASIC0.89□□□□□ -2.27
HPF1Q9NWY4 ZNF299P-201ENST00000406845 1804 ntBASIC0.89□□□□□ -2.27
HPF1Q9NWY4 RNY3P3-201ENST00000363816 102 ntBASIC0.89□□□□□ -2.27
HPF1Q9NWY4 RNU1-93P-201ENST00000364704 169 ntBASIC0.89□□□□□ -2.27
HPF1Q9NWY4 Y_RNA.490-201ENST00000384413 102 ntBASIC0.89□□□□□ -2.27
HPF1Q9NWY4 Y_RNA.533-201ENST00000384596 114 ntBASIC0.89□□□□□ -2.27
HPF1Q9NWY4 AC104332.1-201ENST00000440471 797 ntBASIC0.89□□□□□ -2.27
HPF1Q9NWY4 AC018710.1-201ENST00000506509 158 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms