Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
CLN6Q9NWW5 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.68□□□□□ -2.3
CLN6Q9NWW5 RNU6-969P-201ENST00000383900 105 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 RNU6-1080P-201ENST00000383982 107 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 RNU2-66P-201ENST00000410650 161 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 ZNF885P-201ENST00000420174 1098 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 AC104332.1-201ENST00000440471 797 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.67□□□□□ -2.3
CLN6Q9NWW5 LINC01399-202ENST00000458450 244 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 HMGN2P26-201ENST00000463169 339 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 AC091021.1-201ENST00000468051 388 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.67□□□□□ -2.3
CLN6Q9NWW5 AC107401.1-201ENST00000503426 685 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 Y_RNA.683-201ENST00000516508 93 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 Y_RNA.704-201ENST00000516851 102 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 RNU6-341P-201ENST00000516973 96 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 AP002001.1-203ENST00000534002 267 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.67□□□□□ -2.3
CLN6Q9NWW5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.67□□□□□ -2.3
CLN6Q9NWW5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.67□□□□□ -2.3
CLN6Q9NWW5 MIR5696-201ENST00000578474 85 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 AC092954.2-201ENST00000609103 430 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.67□□□□□ -2.3
CLN6Q9NWW5 AC005592.1-201ENST00000566527 1640 ntBASIC0.67□□□□□ -2.3
CLN6Q9NWW5 SNORA20B-201ENST00000384220 132 ntBASIC0.66□□□□□ -2.3
CLN6Q9NWW5 RNU6-376P-201ENST00000384731 106 ntBASIC0.66□□□□□ -2.3
CLN6Q9NWW5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CLN6Q9NWW5 RNA5SP482-201ENST00000391269 118 ntBASIC0.66□□□□□ -2.3
CLN6Q9NWW5 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.66□□□□□ -2.3
CLN6Q9NWW5 AC243428.1-201ENST00000421099 264 ntBASIC0.66□□□□□ -2.3
CLN6Q9NWW5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.66□□□□□ -2.3
CLN6Q9NWW5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.66□□□□□ -2.3
CLN6Q9NWW5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.66□□□□□ -2.3
CLN6Q9NWW5 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.66□□□□□ -2.3
CLN6Q9NWW5 RPS26P48-201ENST00000491713 339 ntBASIC0.66□□□□□ -2.3
CLN6Q9NWW5 AC018710.1-201ENST00000506509 158 ntBASIC0.66□□□□□ -2.3
CLN6Q9NWW5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.66□□□□□ -2.3
CLN6Q9NWW5 AP002004.2-201ENST00000531656 154 ntBASIC0.66□□□□□ -2.3
CLN6Q9NWW5 MIR3973-201ENST00000579824 107 ntBASIC0.66□□□□□ -2.3
CLN6Q9NWW5 MIR4524B-201ENST00000581569 115 ntBASIC0.66□□□□□ -2.3
CLN6Q9NWW5 MIR4273-201ENST00000582824 84 ntBASIC0.66□□□□□ -2.3
CLN6Q9NWW5 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 SNORA1B-201ENST00000362535 133 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.135-201ENST00000363439 95 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 RNU6-392P-201ENST00000364926 101 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 RNU6-407P-201ENST00000365280 104 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 RNU6-483P-201ENST00000384088 108 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 RNU6-306P-201ENST00000384617 107 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 RNU6-780P-201ENST00000391030 104 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 USMG5P1-201ENST00000425964 177 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.65□□□□□ -2.31
CLN6Q9NWW5 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.65□□□□□ -2.31
CLN6Q9NWW5 RNU7-90P-201ENST00000459216 62 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 RNU7-21P-201ENST00000459430 62 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 RNU7-66P-201ENST00000459469 62 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 SNORD111.1-201ENST00000516421 86 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 MIR3672-201ENST00000584290 82 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 NBR2-204ENST00000587322 63 ntBASIC0.65□□□□□ -2.31
CLN6Q9NWW5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.212-201ENST00000364177 102 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.405-201ENST00000383979 100 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.451-201ENST00000384200 100 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 SNORD116-13-201ENST00000384408 92 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.524-201ENST00000384564 100 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.533-201ENST00000384596 114 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.561-201ENST00000384694 100 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 FGF7P8-201ENST00000402994 292 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 AC018865.2-201ENST00000423631 129 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 USP9YP16-201ENST00000430287 407 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.64□□□□□ -2.31
CLN6Q9NWW5 USP9YP23-201ENST00000455085 407 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 AC019235.1-201ENST00000503847 207 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 RNU6-1114P-201ENST00000516022 107 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 RNU6-1291P-201ENST00000516591 104 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.64□□□□□ -2.31
CLN6Q9NWW5 AL117336.2-201ENST00000602435 335 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 snoU13.31-201ENST00000607291 104 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 Z99129.1-201ENST00000612510 255 ntBASIC0.64□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.256-201ENST00000364594 104 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 SNORD116-9-201ENST00000384000 95 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.414-201ENST00000384011 101 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 SNORD116-3-201ENST00000384287 95 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 SNORD116-7-201ENST00000384404 95 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 SNORD116-5-201ENST00000384462 95 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 SNORA75.2-201ENST00000391138 150 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 SNORA75.3-201ENST00000391231 150 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 MTCYBP4-201ENST00000401524 249 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 RNU6-908P-201ENST00000410160 94 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 MTND3P23-201ENST00000431980 347 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 RPEP5-201ENST00000441137 268 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 AC245047.8-201ENST00000456455 284 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.63□□□□□ -2.31
CLN6Q9NWW5 AC046134.1-201ENST00000514454 666 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 RNA5SP20-201ENST00000515976 84 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 RNU6-1278P-201ENST00000516130 107 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 RNA5SP255-201ENST00000516370 107 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 RNU6-113P-201ENST00000516653 101 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.706-201ENST00000516933 99 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 AC093023.1-201ENST00000547375 507 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms