Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC124312.5-201ENST00000604451 268 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.772-201ENST00000606692 102 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 MTND4P1-201ENST00000457501 1466 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 ZNF702P-202ENST00000434269 1966 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 MIR410-201ENST00000362222 80 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 RNU6-1310P-201ENST00000384153 107 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 RNU6-1160P-201ENST00000384546 104 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 RNU6-823P-201ENST00000391042 103 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 MIR1262-201ENST00000408276 93 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.11□□□□□ -2.07
DDX4Q9NQI0 RNU1-131P-201ENST00000458943 161 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.11□□□□□ -2.07
DDX4Q9NQI0 MIR4659A-201ENST00000580269 81 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 AC022432.1-201ENST00000595739 310 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 AC104695.3-201ENST00000604052 296 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.11□□□□□ -2.07
DDX4Q9NQI0 AL627230.6-201ENST00000611129 280 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 AC240442.1-201ENST00000616055 283 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 snoZ196.1-201ENST00000625269 89 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
DDX4Q9NQI0 LINC02555-201ENST00000563933 1951 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 RNU6-661P-201ENST00000362409 107 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.152-201ENST00000363578 100 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 SNORD87-201ENST00000364849 89 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 RNU6-708P-201ENST00000384217 107 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.471-201ENST00000384312 102 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.498-201ENST00000384460 102 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 MIR1252-201ENST00000408861 65 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 ELOCP21-201ENST00000412558 336 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 HMGN2P38-201ENST00000423806 265 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 RPL23AP6-201ENST00000446637 472 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 RNU7-57P-201ENST00000459540 60 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 AC010531.2-201ENST00000465012 153 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 AC010469.2-201ENST00000496412 480 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 RNU6-107P-201ENST00000516643 102 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.715-201ENST00000517082 110 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 MIR3684-201ENST00000579779 74 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 AL355297.3-201ENST00000604082 446 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 AL353621.2-201ENST00000605340 133 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.1□□□□□ -2.07
DDX4Q9NQI0 AL357075.2-201ENST00000614906 189 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 AC130454.1-201ENST00000622948 401 ntBASIC2.1□□□□□ -2.07
DDX4Q9NQI0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.230-201ENST00000364348 109 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 SNORA16.1-201ENST00000364597 132 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.338-201ENST00000365320 114 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 RNU6-926P-201ENST00000384075 107 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.458-201ENST00000384240 102 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 MIR548B-201ENST00000385247 97 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 RNU6-985P-201ENST00000410182 104 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 AC008134.1-201ENST00000420943 193 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.09□□□□□ -2.07
DDX4Q9NQI0 RPEP5-201ENST00000441137 268 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 MTCO1P44-201ENST00000441935 243 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 RPL26P26-201ENST00000480251 434 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 RNU6-764P-201ENST00000516396 105 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.09□□□□□ -2.07
DDX4Q9NQI0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.09□□□□□ -2.07
DDX4Q9NQI0 MIR4255-201ENST00000579351 72 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 MIR4303-201ENST00000581299 66 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 AC008749.1-201ENST00000597650 306 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 AC005034.5-201ENST00000604219 466 ntBASIC2.09□□□□□ -2.07
DDX4Q9NQI0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.09□□□□□ -2.07
DDX4Q9NQI0 AC008555.8-201ENST00000623602 2168 ntBASIC2.09□□□□□ -2.08
DDX4Q9NQI0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
DDX4Q9NQI0 Y_RNA.439-201ENST00000384119 94 ntBASIC2.08□□□□□ -2.08
DDX4Q9NQI0 MIR606-201ENST00000384851 96 ntBASIC2.08□□□□□ -2.08
DDX4Q9NQI0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
DDX4Q9NQI0 AC139712.2-201ENST00000424302 339 ntBASIC2.08□□□□□ -2.08
DDX4Q9NQI0 RAB28P5-201ENST00000427490 651 ntBASIC2.08□□□□□ -2.08
DDX4Q9NQI0 RNU6-221P-201ENST00000459541 99 ntBASIC2.08□□□□□ -2.08
DDX4Q9NQI0 RNU6-408P-201ENST00000515910 100 ntBASIC2.08□□□□□ -2.08
DDX4Q9NQI0 RNU6-856P-201ENST00000516959 98 ntBASIC2.08□□□□□ -2.08
DDX4Q9NQI0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.08□□□□□ -2.08
DDX4Q9NQI0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX4Q9NQI0 AC113195.1-201ENST00000579952 141 ntBASIC2.08□□□□□ -2.08
DDX4Q9NQI0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.08□□□□□ -2.08
DDX4Q9NQI0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.08□□□□□ -2.08
DDX4Q9NQI0 AL021879.1-201ENST00000611756 288 ntBASIC2.08□□□□□ -2.08
DDX4Q9NQI0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX4Q9NQI0 AC022202.1-201ENST00000613515 211 ntBASIC2.08□□□□□ -2.08
DDX4Q9NQI0 MIR3674-201ENST00000636576 68 ntBASIC2.08□□□□□ -2.08
DDX4Q9NQI0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.08□□□□□ -2.08
DDX4Q9NQI0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
DDX4Q9NQI0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
DDX4Q9NQI0 Y_RNA.145-201ENST00000363527 102 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 RNU6-450P-201ENST00000364654 107 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 RNA5SP37-201ENST00000365420 130 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 Y_RNA.527-201ENST00000384573 102 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 MIR1185-2-201ENST00000408687 86 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 RNU4-62P-201ENST00000410125 130 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 RNA5SP475-201ENST00000410568 110 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 AL390729.2-201ENST00000416137 156 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 AC073910.1-201ENST00000445047 438 ntBASIC2.07□□□□□ -2.08
DDX4Q9NQI0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms