Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 GMFBP1-201ENST00000467831 427 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 SNORA25.12-201ENST00000516202 82 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 SNORD27.1-201ENST00000516319 72 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 MIR4764-201ENST00000580680 88 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 AC104408.1-201ENST00000605241 170 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 AL096861.1-201ENST00000610899 123 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 uc_338.22-201ENST00000622722 187 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 AC027279.3-201ENST00000625055 122 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-181P-201ENST00000363225 107 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 Y_RNA.267-201ENST00000364679 109 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 SNORA2A-201ENST00000383885 135 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 PIGPP3-201ENST00000425307 415 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 CALM2P4-201ENST00000430810 426 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 AC009961.2-201ENST00000435771 251 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 SNORD42A-201ENST00000459584 64 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 RPS3AP17-201ENST00000472594 777 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 RPL23AP75-201ENST00000491601 451 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 SNORA25.14-201ENST00000516481 132 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 RNU7-28P-201ENST00000516759 62 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 RNU6-612P-201ENST00000516909 102 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 RNU6-445P-201ENST00000516949 107 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 AP002004.2-201ENST00000531656 154 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 AC245014.2-201ENST00000603689 287 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 AC246785.4-201ENST00000605374 287 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 AL391834.2-201ENST00000609982 546 ntBASIC0.03□□□□□ -2.41
KIAA1549Q9HCM3 MIR411-201ENST00000362239 96 ntBASIC0.02□□□□□ -2.41
KIAA1549Q9HCM3 RNU6-784P-201ENST00000384330 106 ntBASIC0.02□□□□□ -2.41
KIAA1549Q9HCM3 MIR520F-201ENST00000384824 87 ntBASIC0.02□□□□□ -2.41
KIAA1549Q9HCM3 MIR573-201ENST00000384964 99 ntBASIC0.02□□□□□ -2.41
KIAA1549Q9HCM3 MTCO3P10-201ENST00000455912 772 ntBASIC0.02□□□□□ -2.41
KIAA1549Q9HCM3 SNORA14.1-201ENST00000516113 141 ntBASIC0.02□□□□□ -2.41
KIAA1549Q9HCM3 RNU1-117P-201ENST00000517041 158 ntBASIC0.02□□□□□ -2.41
KIAA1549Q9HCM3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
KIAA1549Q9HCM3 AC068790.2-201ENST00000602601 557 ntBASIC0.02□□□□□ -2.41
KIAA1549Q9HCM3 AP000720.1-201ENST00000625091 483 ntBASIC0.02□□□□□ -2.41
KIAA1549Q9HCM3 MTND4P12-201ENST00000498999 1377 ntBASIC0.02□□□□□ -2.41
KIAA1549Q9HCM3 RNU6-500P-201ENST00000362349 107 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 RNU6-1266P-201ENST00000362794 105 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 SNORD68-201ENST00000363214 84 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 Y_RNA.458-201ENST00000384240 102 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 RNU6-125P-201ENST00000384505 107 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 RNA5SP219-201ENST00000390940 113 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 RNU6-700P-201ENST00000391043 107 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 AL663109.1-201ENST00000411498 844 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 AL022718.1-201ENST00000412004 84 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 DAP3P1-201ENST00000441522 278 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 MTND2P14-201ENST00000482139 351 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 RPL23AP54-201ENST00000495129 419 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 AC093534.1-201ENST00000504977 132 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 AL157687.1-201ENST00000554853 619 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 SNORD87-201ENST00000364849 89 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 RNU4-66P-201ENST00000365199 138 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 MIR1827-201ENST00000408549 66 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 HSFY5P-201ENST00000453726 309 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 TRBVB-201ENST00000477100 408 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 RNU6-977P-201ENST00000516411 103 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 MTND4P7-201ENST00000523876 130 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 RPL21P9-201ENST00000556149 474 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 AC131055.1-201ENST00000584626 316 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 AC104260.1-201ENST00000616660 539 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 AC007671.2-201ENST00000637344 619 ntBASIC0.01□□□□□ -2.41
KIAA1549Q9HCM3 MIR18A-201ENST00000362310 71 ntBASIC0□□□□□ -2.41
KIAA1549Q9HCM3 RNU6-369P-201ENST00000362515 102 ntBASIC0□□□□□ -2.41
KIAA1549Q9HCM3 AL008987.1-201ENST00000415528 237 ntBASIC0□□□□□ -2.41
KIAA1549Q9HCM3 USP9YP12-201ENST00000450481 570 ntBASIC0□□□□□ -2.41
KIAA1549Q9HCM3 AC067940.1-201ENST00000458411 300 ntBASIC0□□□□□ -2.41
KIAA1549Q9HCM3 RNU6-341P-201ENST00000516973 96 ntBASIC0□□□□□ -2.41
KIAA1549Q9HCM3 RNU7-128P-201ENST00000517247 62 ntBASIC0□□□□□ -2.41
KIAA1549Q9HCM3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0□□□□□ -2.41
KIAA1549Q9HCM3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0□□□□□ -2.41
KIAA1549Q9HCM3 MTCO3P23-201ENST00000561363 289 ntBASIC0□□□□□ -2.41
KIAA1549Q9HCM3 AC120024.3-201ENST00000603167 156 ntBASIC0□□□□□ -2.41
KIAA1549Q9HCM3 AC064836.2-201ENST00000609491 462 ntBASIC0□□□□□ -2.41
KIAA1549Q9HCM3 AC016597.2-201ENST00000613256 341 ntBASIC0□□□□□ -2.41
KIAA1549Q9HCM3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 SNORD44.1-201ENST00000363202 61 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 RNU6-873P-201ENST00000363833 107 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 RNU2-9P-201ENST00000410194 145 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 Z99497.1-201ENST00000421282 135 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 USP9YP29-201ENST00000445112 563 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 CYCTP-201ENST00000504253 315 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 AC005178.1-201ENST00000508392 440 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 RNU2-56P-201ENST00000516826 190 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 AP003716.2-201ENST00000528260 108 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 AP002963.1-201ENST00000530590 184 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 MIR4431-201ENST00000579990 94 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 MIR8076-201ENST00000611401 83 ntBASIC-0.01□□□□□ -2.41
KIAA1549Q9HCM3 MIRLET7D-201ENST00000362263 87 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms