Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.07□□□□□ -2.4
CHMP4BQ9H444 Z98949.2-201ENST00000440996 144 ntBASIC0.07□□□□□ -2.4
CHMP4BQ9H444 AC010598.1-201ENST00000510378 103 ntBASIC0.07□□□□□ -2.4
CHMP4BQ9H444 RNU6-1096P-201ENST00000517089 102 ntBASIC0.07□□□□□ -2.4
CHMP4BQ9H444 MTND4P7-201ENST00000523876 130 ntBASIC0.07□□□□□ -2.4
CHMP4BQ9H444 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.07□□□□□ -2.4
CHMP4BQ9H444 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.07□□□□□ -2.4
CHMP4BQ9H444 AC016597.2-201ENST00000613256 341 ntBASIC0.07□□□□□ -2.4
CHMP4BQ9H444 RNU6-873P-201ENST00000363833 107 ntBASIC0.06□□□□□ -2.4
CHMP4BQ9H444 RNU4-41P-201ENST00000364426 143 ntBASIC0.06□□□□□ -2.4
CHMP4BQ9H444 SNORD113.3-201ENST00000364630 78 ntBASIC0.06□□□□□ -2.4
CHMP4BQ9H444 MIR520C-201ENST00000385005 87 ntBASIC0.06□□□□□ -2.4
CHMP4BQ9H444 RNU2-70P-201ENST00000410718 179 ntBASIC0.06□□□□□ -2.4
CHMP4BQ9H444 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.06□□□□□ -2.4
CHMP4BQ9H444 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.06□□□□□ -2.4
CHMP4BQ9H444 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.06□□□□□ -2.4
CHMP4BQ9H444 snoU13.18-201ENST00000459483 104 ntBASIC0.06□□□□□ -2.4
CHMP4BQ9H444 AC023442.1-201ENST00000531247 422 ntBASIC0.06□□□□□ -2.4
CHMP4BQ9H444 MIR4431-201ENST00000579990 94 ntBASIC0.06□□□□□ -2.4
CHMP4BQ9H444 AL162730.1-201ENST00000605734 292 ntBASIC0.06□□□□□ -2.4
CHMP4BQ9H444 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.06□□□□□ -2.4
CHMP4BQ9H444 MIR1-1-201ENST00000362147 71 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 RNU6-297P-201ENST00000384636 107 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 Y_RNA.560-201ENST00000384689 102 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 RNU6-1105P-201ENST00000384774 107 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 MIR573-201ENST00000384964 99 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 MIR32-201ENST00000384965 70 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 PIGPP3-201ENST00000425307 415 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 MTND4P32-201ENST00000437189 1237 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 AC091179.3-201ENST00000474761 144 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 CYCTP-201ENST00000504253 315 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 MRPS36P3-201ENST00000519284 130 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.05□□□□□ -2.4
CHMP4BQ9H444 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.05□□□□□ -2.4
CHMP4BQ9H444 AC120024.3-201ENST00000603167 156 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 AP000720.1-201ENST00000625091 483 ntBASIC0.05□□□□□ -2.4
CHMP4BQ9H444 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CHMP4BQ9H444 Y_RNA.184-201ENST00000363884 108 ntBASIC0.04□□□□□ -2.4
CHMP4BQ9H444 Y_RNA.796-201ENST00000364268 102 ntBASIC0.04□□□□□ -2.4
CHMP4BQ9H444 Y_RNA.799-201ENST00000364992 102 ntBASIC0.04□□□□□ -2.4
CHMP4BQ9H444 Y_RNA.476-201ENST00000384347 108 ntBASIC0.04□□□□□ -2.4
CHMP4BQ9H444 RNU6-376P-201ENST00000384731 106 ntBASIC0.04□□□□□ -2.4
CHMP4BQ9H444 MIR452-201ENST00000385020 85 ntBASIC0.04□□□□□ -2.4
CHMP4BQ9H444 SNRPGP12-201ENST00000449481 213 ntBASIC0.04□□□□□ -2.4
CHMP4BQ9H444 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.04□□□□□ -2.4
CHMP4BQ9H444 HSFY5P-201ENST00000453726 309 ntBASIC0.04□□□□□ -2.4
CHMP4BQ9H444 MTCO3P10-201ENST00000455912 772 ntBASIC0.04□□□□□ -2.4
CHMP4BQ9H444 AL157687.1-201ENST00000554853 619 ntBASIC0.04□□□□□ -2.4
CHMP4BQ9H444 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.04□□□□□ -2.4
CHMP4BQ9H444 AC073544.1-201ENST00000600110 1595 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 SNORD44.1-201ENST00000363202 61 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 RNA5SP62-201ENST00000363457 110 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 RNU6-654P-201ENST00000364373 107 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 Y_RNA.319-201ENST00000365138 92 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 RNU4-45P-201ENST00000365469 141 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 RNU6-1304P-201ENST00000411374 106 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.03□□□□□ -2.4
CHMP4BQ9H444 AC074133.1-201ENST00000515696 183 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 RNU6-189P-201ENST00000516120 101 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 SNORA62.5-201ENST00000516634 120 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 RNU6-1198P-201ENST00000516904 67 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 SNORA74.3-201ENST00000517108 154 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.03□□□□□ -2.4
CHMP4BQ9H444 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.03□□□□□ -2.4
CHMP4BQ9H444 CPDP1-201ENST00000579660 283 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.03□□□□□ -2.4
CHMP4BQ9H444 AC023932.2-201ENST00000603176 175 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
CHMP4BQ9H444 RNA5SP48-201ENST00000363969 126 ntBASIC0.02□□□□□ -2.41
CHMP4BQ9H444 SNORA2B-201ENST00000384583 137 ntBASIC0.02□□□□□ -2.41
CHMP4BQ9H444 RNU11-2P-201ENST00000516898 142 ntBASIC0.02□□□□□ -2.41
CHMP4BQ9H444 AC091144.1-201ENST00000519573 138 ntBASIC0.02□□□□□ -2.41
CHMP4BQ9H444 AL357078.3-201ENST00000607528 618 ntBASIC0.02□□□□□ -2.41
CHMP4BQ9H444 AC010999.1-201ENST00000611856 324 ntBASIC0.02□□□□□ -2.41
CHMP4BQ9H444 AC015726.2-201ENST00000620112 122 ntBASIC0.02□□□□□ -2.41
CHMP4BQ9H444 AC092634.7-201ENST00000621022 103 ntBASIC0.02□□□□□ -2.41
CHMP4BQ9H444 AC027279.3-201ENST00000625055 122 ntBASIC0.02□□□□□ -2.41
CHMP4BQ9H444 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.02□□□□□ -2.41
CHMP4BQ9H444 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
CHMP4BQ9H444 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
CHMP4BQ9H444 MIR18A-201ENST00000362310 71 ntBASIC0.01□□□□□ -2.41
CHMP4BQ9H444 RNU6-1120P-201ENST00000362988 108 ntBASIC0.01□□□□□ -2.41
CHMP4BQ9H444 RNY1-201ENST00000364228 113 ntBASIC0.01□□□□□ -2.41
CHMP4BQ9H444 RNU6-933P-201ENST00000384424 107 ntBASIC0.01□□□□□ -2.41
CHMP4BQ9H444 CALM2P3-201ENST00000400429 449 ntBASIC0.01□□□□□ -2.41
CHMP4BQ9H444 AL590002.1-201ENST00000406554 418 ntBASIC0.01□□□□□ -2.41
CHMP4BQ9H444 AL606923.1-201ENST00000406616 190 ntBASIC0.01□□□□□ -2.41
CHMP4BQ9H444 Z82188.1-201ENST00000436709 154 ntBASIC0.01□□□□□ -2.41
CHMP4BQ9H444 SNORD42A-201ENST00000459584 64 ntBASIC0.01□□□□□ -2.41
CHMP4BQ9H444 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.01□□□□□ -2.41
CHMP4BQ9H444 AC091885.1-201ENST00000506658 268 ntBASIC0.01□□□□□ -2.41
CHMP4BQ9H444 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
CHMP4BQ9H444 AC068137.4-201ENST00000638485 296 ntBASIC0.01□□□□□ -2.41
CHMP4BQ9H444 MIR411-201ENST00000362239 96 ntBASIC0□□□□□ -2.41
CHMP4BQ9H444 RNU6-996P-201ENST00000365438 107 ntBASIC0□□□□□ -2.41
CHMP4BQ9H444 SNORD14.1-201ENST00000365609 90 ntBASIC0□□□□□ -2.41
CHMP4BQ9H444 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0□□□□□ -2.41
CHMP4BQ9H444 SNORA20B-201ENST00000384220 132 ntBASIC0□□□□□ -2.41
CHMP4BQ9H444 MIR516B2-201ENST00000385190 85 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms