Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC018462.2-201ENST00000605375 395 ntBASIC1.13□□□□□ -2.23
POLR1EQ9GZS1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.13□□□□□ -2.23
POLR1EQ9GZS1 AC068647.2-201ENST00000637380 353 ntBASIC1.13□□□□□ -2.23
POLR1EQ9GZS1 MTND5P16-201ENST00000460269 1703 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 SNORA70.7-201ENST00000384159 133 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 SNORA25-201ENST00000384384 134 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 Y_RNA.490-201ENST00000384413 102 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 RNU1-139P-201ENST00000391307 165 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 MIR1277-201ENST00000408536 78 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 USMG5P1-201ENST00000425964 177 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 RNU6-1114P-201ENST00000516022 107 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 AC093023.1-201ENST00000547375 507 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 AL137100.2-201ENST00000555786 315 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 MIR5701-3-201ENST00000578890 82 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 MIR5701-1-201ENST00000585138 82 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 AC016727.1-205ENST00000605437 569 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 BX284668.6-201ENST00000606899 438 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 AC005014.2-201ENST00000607795 599 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 AC007014.2-201ENST00000615581 479 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 MIR5701-2-201ENST00000615634 82 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 AC002553.4-201ENST00000616896 331 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 AC073869.6-201ENST00000640656 341 ntBASIC1.12□□□□□ -2.23
POLR1EQ9GZS1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 Y_RNA.6-201ENST00000362350 114 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 RNU6-1266P-201ENST00000362794 105 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 RNU6-392P-201ENST00000364926 101 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 RNU6-440P-201ENST00000390882 105 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 MIR548K-201ENST00000408406 116 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 RNU6-1001P-201ENST00000411265 100 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 AL139396.1-201ENST00000421137 167 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 AC245047.3-201ENST00000429428 127 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 USP9YP16-201ENST00000430287 407 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 USP9YP23-201ENST00000455085 407 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 RNU7-99P-201ENST00000516271 62 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 RNU6-107P-201ENST00000516643 102 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 Y_RNA.706-201ENST00000516933 99 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 RNA5SP404-201ENST00000517118 132 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 AC023157.2-201ENST00000540596 141 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 AC125232.2-201ENST00000592457 143 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 AC100812.1-201ENST00000607622 580 ntBASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
POLR1EQ9GZS1 RNU6-874P-201ENST00000362390 105 ntBASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 Y_RNA.184-201ENST00000363884 108 ntBASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 RNU6-53P-201ENST00000365367 106 ntBASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 MIR548F5-201ENST00000408421 86 ntBASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 Y_RNA.594-201ENST00000410373 140 ntBASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 RNU6-321P-201ENST00000410912 106 ntBASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 EIF1P2-201ENST00000428233 350 ntBASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 Y_RNA.670-201ENST00000516255 105 ntBASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 AL357075.2-201ENST00000614906 189 ntBASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 AC091895.1-201ENST00000624494 256 ntBASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.1□□□□□ -2.23
POLR1EQ9GZS1 RNU5F-3P-201ENST00000363767 117 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 MIR329-1-201ENST00000385028 80 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 MIR190B-201ENST00000401119 79 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 MRPL42P3-201ENST00000401492 326 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 AL034345.1-201ENST00000407768 123 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 RNU6-1050P-201ENST00000410388 107 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 RPS3AP52-201ENST00000435639 297 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 U8.22-201ENST00000459141 133 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 RPL39P38-201ENST00000467018 153 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 AC010469.2-201ENST00000496412 480 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 AC005840.1-201ENST00000498412 377 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 TRMT112P2-201ENST00000512910 132 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 RNU6-1016P-201ENST00000516689 94 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 AF235103.2-201ENST00000525753 346 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 AC004584.2-201ENST00000570407 410 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 MIR4438-201ENST00000585271 93 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 AL022345.2-201ENST00000606307 135 ntBASIC1.09□□□□□ -2.23
POLR1EQ9GZS1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 Y_RNA.2-201ENST00000362330 96 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 RNU1-22P-201ENST00000363334 158 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 Y_RNA.339-201ENST00000365325 102 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 RNU6-510P-201ENST00000391239 108 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 AL355796.1-201ENST00000406706 323 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 ELOCP21-201ENST00000412558 336 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 MTND3P8-201ENST00000412909 339 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 AL353997.1-201ENST00000432936 108 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 MRPS10P1-201ENST00000448483 130 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms