Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR2681-201ENST00000581814 105 ntBASIC2.75□□□□□ -1.97
SSBP3Q9BWW4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.75□□□□□ -1.97
SSBP3Q9BWW4 AL021707.8-201ENST00000609428 183 ntBASIC2.75□□□□□ -1.97
SSBP3Q9BWW4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.75□□□□□ -1.97
SSBP3Q9BWW4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSBP3Q9BWW4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 RNU6-880P-201ENST00000384526 107 ntBASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 MIR483-201ENST00000385070 76 ntBASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 SNORA26-201ENST00000391286 122 ntBASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 RNU6-57P-201ENST00000411348 103 ntBASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 AC097463.2-201ENST00000421074 142 ntBASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 TRIAP1P1-201ENST00000427062 225 ntBASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 AC080013.2-201ENST00000460866 323 ntBASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 RNU6-63P-201ENST00000516690 95 ntBASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 MIR3651-201ENST00000630427 90 ntBASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.74□□□□□ -1.97
SSBP3Q9BWW4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 RNU6-32P-201ENST00000383948 107 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 RNU6-13P-201ENST00000384248 107 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 RNU6-975P-201ENST00000384296 105 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 SNORA72-201ENST00000384339 132 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 RNU6-12P-201ENST00000384604 107 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 RNU6-41P-201ENST00000384741 107 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 MIR548A1-201ENST00000385041 97 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 MIR1294-201ENST00000408503 142 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 Y_RNA.617-201ENST00000410920 90 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 AL031737.1-201ENST00000450125 223 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 RPS26P45-201ENST00000471748 340 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 SNORA18.4-201ENST00000516440 124 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 AC091178.2-201ENST00000584401 117 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 AC093732.2-201ENST00000607950 274 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 AC107294.3-201ENST00000609211 526 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 MIR7112-201ENST00000616126 65 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 uc_338.4-201ENST00000616635 176 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 AC090517.3-201ENST00000625170 141 ntBASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.73□□□□□ -1.97
SSBP3Q9BWW4 AC010680.1-201ENST00000590024 3590 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 Y_RNA.634-201ENST00000364811 113 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 DYNLT3P1-201ENST00000378574 347 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 SNORA9-201ENST00000384215 133 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 Y_RNA.495-201ENST00000384435 112 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 RNA5SP511-201ENST00000410487 115 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 EIF4EP4-201ENST00000424916 578 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 Y_RNA.649-201ENST00000459077 103 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 AC010531.2-201ENST00000465012 153 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 RN7SKP19-201ENST00000516016 252 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 RNU6-126P-201ENST00000516685 103 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 AC105245.1-201ENST00000581934 244 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 uc_338.1-201ENST00000612113 180 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 AC006435.5-201ENST00000624486 112 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 AC058791.1-201ENST00000608412 3198 ntBASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSBP3Q9BWW4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.71□□□□□ -1.97
SSBP3Q9BWW4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 AC009487.4-201ENST00000624969 3585 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 RNU6-309P-201ENST00000364573 106 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 RNU4-47P-201ENST00000410876 114 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 Z98742.2-201ENST00000431564 187 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 MTATP6P21-201ENST00000440681 189 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 RPS27P29-201ENST00000463110 252 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 RPS29P24-201ENST00000486345 171 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 MIR449C-201ENST00000516047 92 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 RNU6-948P-201ENST00000516374 107 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 SNORA74D-201ENST00000516404 141 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 RN7SKP57-201ENST00000517248 293 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 RPL23AP91-201ENST00000569211 455 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 MIR4474-201ENST00000579189 78 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 MIR5582-201ENST00000579697 68 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 AC025166.1-201ENST00000612411 163 ntBASIC2.71□□□□□ -1.98
SSBP3Q9BWW4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 AC000403.1-201ENST00000613696 3585 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 AC103988.1-201ENST00000566382 2177 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 Y_RNA.203-201ENST00000364106 102 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 AC008134.1-201ENST00000420943 193 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 CST9LP2-201ENST00000437612 320 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms