Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
NDC1Q9BTX1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
NDC1Q9BTX1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
NDC1Q9BTX1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NDC1Q9BTX1 RNU6-461P-201ENST00000364195 107 ntBASIC2.68□□□□□ -1.98
NDC1Q9BTX1 SNORD31B-201ENST00000364977 69 ntBASIC2.68□□□□□ -1.98
NDC1Q9BTX1 RNU7-57P-201ENST00000459540 60 ntBASIC2.68□□□□□ -1.98
NDC1Q9BTX1 ATP5EP1-201ENST00000510257 156 ntBASIC2.68□□□□□ -1.98
NDC1Q9BTX1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.68□□□□□ -1.98
NDC1Q9BTX1 MIR4319-201ENST00000577285 85 ntBASIC2.68□□□□□ -1.98
NDC1Q9BTX1 AL356280.1-201ENST00000603614 379 ntBASIC2.68□□□□□ -1.98
NDC1Q9BTX1 AC108706.1-201ENST00000611053 297 ntBASIC2.68□□□□□ -1.98
NDC1Q9BTX1 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.68□□□□□ -1.98
NDC1Q9BTX1 AC138915.1-201ENST00000565427 1685 ntBASIC2.68□□□□□ -1.98
NDC1Q9BTX1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NDC1Q9BTX1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
NDC1Q9BTX1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.68□□□□□ -1.98
NDC1Q9BTX1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
NDC1Q9BTX1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
NDC1Q9BTX1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.68□□□□□ -1.98
NDC1Q9BTX1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
NDC1Q9BTX1 AL136360.1-201ENST00000503377 1900 ntBASIC2.68□□□□□ -1.98
NDC1Q9BTX1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.67□□□□□ -1.98
NDC1Q9BTX1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.67□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.182-201ENST00000363880 111 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 RNU4-10P-201ENST00000364383 140 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 RNU6-438P-201ENST00000365561 103 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.412-201ENST00000384001 104 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.456-201ENST00000384232 111 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 RNU6-301P-201ENST00000384277 107 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 SNORD14D-201ENST00000384390 87 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 RNU6-220P-201ENST00000390919 107 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 RPS20P10-201ENST00000451209 253 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 RN7SKP132-201ENST00000516001 208 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 SNORA70.12-201ENST00000516084 153 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 SNORA48.11-201ENST00000517015 89 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.67□□□□□ -1.98
NDC1Q9BTX1 AC021269.2-201ENST00000532318 330 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.67□□□□□ -1.98
NDC1Q9BTX1 MIR3684-201ENST00000579779 74 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 MIR3162-201ENST00000581818 82 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 AL355297.2-201ENST00000604792 129 ntBASIC2.67□□□□□ -1.98
NDC1Q9BTX1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NDC1Q9BTX1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NDC1Q9BTX1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.66□□□□□ -1.98
NDC1Q9BTX1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.121-201ENST00000363309 113 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.124-201ENST00000363339 93 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.172-201ENST00000363765 102 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 RNU6-899P-201ENST00000363947 107 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.272-201ENST00000364696 102 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.293-201ENST00000364908 93 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 RNU6-381P-201ENST00000391259 108 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 RNA5SP184-201ENST00000411071 108 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 RPS27AP9-201ENST00000477681 438 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.66□□□□□ -1.98
NDC1Q9BTX1 MIR3117-201ENST00000584034 78 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 AC025754.2-201ENST00000606491 432 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 MIR1248-201ENST00000629190 106 ntBASIC2.66□□□□□ -1.98
NDC1Q9BTX1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.66□□□□□ -1.98
NDC1Q9BTX1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NDC1Q9BTX1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NDC1Q9BTX1 Y_RNA.75-201ENST00000362927 97 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 RNU6-312P-201ENST00000364629 107 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 AL355497.1-201ENST00000406262 551 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 AL355796.1-201ENST00000406706 323 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 AC016717.1-201ENST00000448918 286 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 HMGN2P18-201ENST00000450680 270 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 RNU7-141P-201ENST00000459304 62 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 RN7SL429P-201ENST00000479090 223 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 RN7SL489P-201ENST00000486185 223 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 RN7SL327P-201ENST00000488659 223 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.65□□□□□ -1.99
NDC1Q9BTX1 ZNF861P-201ENST00000588126 639 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 RN7SL853P-201ENST00000617250 223 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 snoZ196.1-201ENST00000625269 89 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 AC132825.6-201ENST00000638861 357 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.65□□□□□ -1.99
NDC1Q9BTX1 FAM35CP-201ENST00000554755 2470 ntBASIC2.65□□□□□ -1.99
NDC1Q9BTX1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
NDC1Q9BTX1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.64□□□□□ -1.99
NDC1Q9BTX1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NDC1Q9BTX1 Y_RNA.23-201ENST00000362496 106 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 RNU1-23P-201ENST00000363361 144 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 RNU6-1130P-201ENST00000365434 107 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 SNORA20B-201ENST00000384220 132 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 RNU6-975P-201ENST00000384296 105 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 SNORA8.3-201ENST00000384679 139 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 Y_RNA.572-201ENST00000384757 98 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 MIR626-201ENST00000385032 94 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 MIR561-201ENST00000385216 97 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 MIR181B1-201ENST00000385240 110 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 MIR613-201ENST00000385248 95 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 MIR887-201ENST00000401258 79 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 AL138827.1-201ENST00000402666 306 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 AC063976.3-201ENST00000426849 329 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms