Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC245047.4-201ENST00000433189 144 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 AC108059.2-201ENST00000434626 151 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 AC079804.2-201ENST00000490376 200 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 7SK.10-201ENST00000621414 298 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 CENPCP1-201ENST00000533085 2578 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 MTND5P10-201ENST00000603719 1809 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-661P-201ENST00000362409 107 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-1309P-201ENST00000363305 108 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.187-201ENST00000363918 113 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.314-201ENST00000365114 102 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-1264P-201ENST00000383891 107 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.459-201ENST00000384251 102 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.496-201ENST00000384444 101 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 RNA5SP467-201ENST00000391274 118 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 AL160004.2-201ENST00000432935 350 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 AC099799.1-201ENST00000439809 192 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 MTND5P22-201ENST00000458380 195 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 AC105758.1-201ENST00000506038 399 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 RNU1-142P-201ENST00000516682 145 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 RNA5SP481-201ENST00000516814 122 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 AC024995.1-201ENST00000523014 93 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 AL117187.1-201ENST00000555482 181 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 AL137100.2-201ENST00000555786 315 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 MIR4680-201ENST00000580906 66 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 AC103810.8-201ENST00000607347 118 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 AC087588.2-201ENST00000617667 426 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 AC138305.3-201ENST00000624988 240 ntBASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HERPUD2Q9BSE4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-1115P-201ENST00000362490 106 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-1301P-201ENST00000362724 104 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-414P-201ENST00000363705 104 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.422-201ENST00000384054 114 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.445-201ENST00000384168 102 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.592-201ENST00000410274 109 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 HSPE1P9-201ENST00000440046 311 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 RNU7-169P-201ENST00000459456 61 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-1170P-201ENST00000515974 106 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.720-201ENST00000517166 92 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 MIR5089-201ENST00000580047 84 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 AL359075.3-201ENST00000613288 217 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 AC091925.1-201ENST00000623204 462 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 MIR219B-201ENST00000637023 88 ntBASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.12□□□□□ -2.07
HERPUD2Q9BSE4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.645-201ENST00000391229 102 ntBASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-985P-201ENST00000410182 104 ntBASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 SNORD12B-201ENST00000410433 91 ntBASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 RNA5SP475-201ENST00000410568 110 ntBASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 FTH1P12-201ENST00000432137 551 ntBASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-625P-201ENST00000459412 107 ntBASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 MTATP8P1-201ENST00000467115 207 ntBASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.661-201ENST00000516003 99 ntBASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 AC018448.1-201ENST00000552843 316 ntBASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 AL357075.2-201ENST00000614906 189 ntBASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HERPUD2Q9BSE4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 AL356292.1-201ENST00000283110 373 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-1040P-201ENST00000383974 107 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-318P-201ENST00000384283 103 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 MIR30A-201ENST00000385092 71 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-360P-201ENST00000390944 104 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-1186P-201ENST00000410429 97 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 RNU2-40P-201ENST00000410833 196 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 ELOCP21-201ENST00000412558 336 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 MTCYBP9-201ENST00000431021 303 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 AC025465.3-201ENST00000510570 311 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 AC002984.1-201ENST00000591692 448 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 AC006006.1-201ENST00000603082 144 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 MIR8074-201ENST00000615081 81 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 AC007485.1-201ENST00000616755 206 ntBASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.1□□□□□ -2.07
HERPUD2Q9BSE4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
HERPUD2Q9BSE4 SNORA33-201ENST00000363664 130 ntBASIC2.09□□□□□ -2.07
HERPUD2Q9BSE4 SNORA63D-201ENST00000364359 132 ntBASIC2.09□□□□□ -2.07
HERPUD2Q9BSE4 RNA5SP37-201ENST00000365420 130 ntBASIC2.09□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.463-201ENST00000384271 102 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms